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<div class="moz-cite-prefix">Hi,<br>
<br>
If you want ortholog groups that include all 17 species,
InParanoid won't work. But if you only need pairwise relationships
(which is usually the case) then it will. Then you have to run
InParanoid for all 17*16/2 pairs.<br>
<br>
Erik Sonnhammer<br>
<br>
On 09/20/2014 11:32 AM, Sammy Desilva wrote:<br>
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cite="mid:CAJXH_1ObFRxxcUSdpo--fLv8eXzhDQRbBvfb7zN4KBqEUhr3Xg@mail.gmail.com"
type="cite">
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<div>Hi, I want to assign orthology relationship among 17
proteomes. Could someone please suggest me how to do it
offline in Inparanoid? The running command for such cases? I
guess putting 3 organism it treats third as outgroup. <br>
</div>
Thanks<br>
</div>
<br>
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