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<p>Yes - I was a bit puzzled by that as the database list doesn't indicate that it is the reference strain but I tried a practice search against another species and when clicking on the Mtb proteins identified the Uniprot link takes me to the protein for M.tb
H37Rv. </p>
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<p>So could I also then request Mycobacterium tuberculosis h37Rv to also be added the RefSeq identifier is <a target="_blank" href="http://www.ncbi.nlm.nih.gov/nuccore/NC_000962.3" style="outline: 0px; color: rgb(100, 42, 143); text-decoration: none; font-family: arial; font-size: 10px; line-height: 13px; text-align: -webkit-center;" id="LPlnk693114" title="http://www.ncbi.nlm.nih.gov/nuccore/NC_000962.3
Ctrl+Click or tap to follow the link">NC_000962.3</a> ?</p>
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<p>Thanks Megan</p>
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<div id="divRplyFwdMsg" dir="ltr"><font face="Calibri, sans-serif" color="#000000" style="font-size:11pt"><b>From:</b> InParanoid <inparanoid-at-sbc.su.se-bounces@lists.su.se> on behalf of Erik Sonnhammer <erik.sonnhammer@scilifelab.se><br>
<b>Sent:</b> Tuesday, October 6, 2015 11:50 AM<br>
<b>To:</b> inparanoid-at-sbc.su.se@lists.su.se<br>
<b>Subject:</b> Re: [Inparanoid] Adding a database to the Inparanoid web interface</font>
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<div class="moz-cite-prefix">On 10/06/2015 04:25 PM, Megan Rees wrote:<br>
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<p>Thank you Erik, </p>
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</p>
<p>I would like to request the addition of </p>
<p>Mycobacterium kansasii ATCC 12478 including its plasmid. These have the Refseq identifiers of <a target="_blank" href="http://www.ncbi.nlm.nih.gov/nuccore/NC_022663.1" id="LPlnk756419" style="outline:0px; color:rgb(100,42,143); text-decoration:none; font-family:arial; font-size:10px; line-height:17.901px">NC_022663.1</a> and <a target="_blank" href="http://www.ncbi.nlm.nih.gov/nuccore/NC_022654.1" title="http://www.ncbi.nlm.nih.gov/nuccore/NC_022654.1
Ctrl+Click or tap to follow the link" style="color:rgb(100,42,143); text-decoration:none; font-family:arial; font-size:10px; line-height:17.901px">NC_022654.1</a>.
I can send you fasta files if that is helpful. </p>
<p>Can I assume that the Mycobacterium tuberculosis is the standard reference strain H37Rv?</p>
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I guess not - clicking on the Uniprot link in the InParanoid Summary gives<br>
<br>
<table class="databaseTable">
<tbody>
<tr>
<td class="first-column"><a href="http://www.uniprot.org/help/taxonomy#strain"><span>Strains
<sup>i</sup></span></a></td>
<td>› 1254<br>
› An03<br>
› Canetti<br>
› Isolate 50410<span style="color:gray">, 50410</span><br>
› Mt103</td>
</tr>
</tbody>
</table>
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/Erik<br>
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<p>Regards</p>
<p>Megan</p>
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<div id="divRplyFwdMsg" dir="ltr"><font face="Calibri, sans-serif" color="#000000" style="font-size:11pt"><b>From:</b> InParanoid
<a class="moz-txt-link-rfc2396E" href="mailto:inparanoid-at-sbc.su.se-bounces@lists.su.se">
<inparanoid-at-sbc.su.se-bounces@lists.su.se></a> on behalf of Erik Sonnhammer <a class="moz-txt-link-rfc2396E" href="mailto:erik.sonnhammer@scilifelab.se">
<erik.sonnhammer@scilifelab.se></a><br>
<b>Sent:</b> Tuesday, October 6, 2015 11:16 AM<br>
<b>To:</b> <a class="moz-txt-link-abbreviated" href="mailto:inparanoid-at-sbc.su.se@lists.su.se">
inparanoid-at-sbc.su.se@lists.su.se</a><br>
<b>Subject:</b> Re: [Inparanoid] Adding a database to the Inparanoid web interface</font>
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<div class="moz-cite-prefix">Sure, but I can't estimate when it will appear.<br>
<br>
Erik<br>
<br>
On 10/06/2015 04:12 PM, Megan Rees wrote:<br>
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<p>How can I request the addition of another organism to the Inparanoid web interface so that I can perform comparisons?</p>
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<p>Thanks Megan</p>
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