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<p>Hi 凌若茗,</p>
<p>The score you are talking about is the 'inparalog score' and it
is also shown in the inparanoid.pl output, but as a percentage.
It is easier to parse this out in the SQL output.</p>
<p>Different results compared to the website could come from e.g.
using different proteomes, different parameters, or different
blast versions.</p>
<p>Erik Sonnhammer<br>
</p>
<br>
<div class="moz-cite-prefix">On 2017-12-21 12:40, 凌若茗 wrote:<br>
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<div style="font-size: 12px;font-family: Arial
Narrow;padding:2px 0 2px 0;">------------------ 原始邮件 ------------------</div>
<div style="font-size: 12px;background:#efefef;padding:8px;">
<div><b>发件人:</b> "凌若茗";<a class="moz-txt-link-rfc2396E" href="mailto:mengling-zhang@qq.com"><mengling-zhang@qq.com></a>;</div>
<div><b>发送时间:</b> 2017年12月21日(星期四) 晚上7:36</div>
<div><b>收件人:</b> "inparanoid-at-sbc.su.se"<a class="moz-txt-link-rfc2396E" href="mailto:inparanoid-at-sbc.su.se@lists.su.se"><inparanoid-at-sbc.su.se@lists.su.se></a>;<wbr></div>
<div><b>主题:</b> seek help for the usage of the InParanoid
software</div>
</div>
<div><br>
</div>
Dear staffs of InParanoid：
<div><br>
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<div>Recently, I downloaded the local version Inparanoid 4.1
to analyse the ortholog groups among some species.
However,the result obtained differed with it from the
InParanoid website(as two attachments to this letter).</div>
<div>the website provides the InParanoid scores(0-1) and the
bootstrap(%) of each cluster, but there is no "InParanoid
scores(0-1)", which is vital for me, in my results. In
this case, I feel disappointed for it. </div>
<div><br>
</div>
<div>Could you help me with this problems? It will be very
meaningful if you can help！</div>
<div>Hoping for your quick response! Thanks in advance！</div>
<div>
Sincerely</div>
<div>
a student from HZAU in China</div>
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