From ingemar.andre at biochemistry.lu.se Mon Jun 6 16:03:12 2022 From: ingemar.andre at biochemistry.lu.se (=?utf-8?B?SW5nZW1hciBBbmRyw6k=?=) Date: Mon, 6 Jun 2022 14:03:12 +0000 Subject: [SocBiN] PhD position in machine learning and protein design Message-ID: We have funding for a PhD position in AI applied to protein design funded by Wallenberg AI, Autonomous systems and Software Program (WASP). The PhD student will join the WASP graduate school. The goal of the PhD position is to develop new machine learning methods for denovo design of proteins that can switch between two or more conformations. The methods will be based on machine learning approaches like the ones that power AlphaFold2. Our lab (https://andrelab.biochemistry.lu.se/) develop computational methods to design complex protein assemblies and predict the structure of proteins and combine that with experimental characterization of proteins and an interest in applying the methodology to the design of proteins. The position will start January 2023, but an earlier start can be possible. To learn more about the details of the project and position, send an email to ingemar.andre at biochemistry.lu.se. Ingemar André Biochemistry & Structural Biology Lund University PO Box 124 221 00 Lund tel: +46 46 222 4470 email: ingemar.andre at biochemistry.lu.se -------------- next part -------------- An HTML attachment was scrubbed... URL: From andersson.robin at gmail.com Tue Jun 7 16:19:25 2022 From: andersson.robin at gmail.com (Robin Andersson) Date: Tue, 7 Jun 2022 14:19:25 +0000 Subject: [SocBiN] Job opportunities in the Novo Nordisk Foundation Center for Genomic Mechanisms of Disease Message-ID: Dear colleagues, We are seeking highly motivated postdoctoral scholars and staff scientists to join a new joint project between laboratories at the Broad Institute and Danish universities to build a Human Gene Regulation Map, as part of the new NNF Center for Genomic Mechanisms of Disease https://www.broadinstitute.org/nnfc/job-opportunities This new effort will seek to build comprehensive maps of gene regulation in the human genome as a resource for uncovering biological mechanisms on common genetic diseases, with an initial focus on cell types relevant to cardiometabolic diseases including type 2 diabetes. We aim to combine recent advances in genomics, molecular biology, single-cell analysis, and stem cell models with approaches in computational biology and machine learning to identify fundamental rules of gene regulation. My lab is seeking a postdoc to develop novel computational and probabilistic methods to model enhancer activity, enhancer-gene regulation and the interplay between regulatory elements within larger regulatory domains, based on perturbation, single cell and genomics data generated within the Center and within the lab: https://employment.ku.dk/faculty/?show=156574 (deadline for applications: June 30) Please email me if you have any question related to the position within my lab. Best regards, Robin -- Robin Andersson, PhD Associate professor The Bioinformatics Centre Department of Biology University of Copenhagen Ole Maaloes Vej 5 DK-2200 Copenhagen N Denmark http://anderssonlab.org Twitter: @robin_andersson -------------- next part -------------- An HTML attachment was scrubbed... URL: From rbh at intomics.com Tue Jun 7 20:09:08 2022 From: rbh at intomics.com (Rasmus Borup Hansen) Date: Tue, 7 Jun 2022 20:09:08 +0200 Subject: [SocBiN] =?utf-8?q?Senior_Associate_=E2=80=93_Scientific_Develope?= =?utf-8?q?r?= Message-ID: <1DDFFF7C-4832-4D8D-85B4-F70BB9C54F4C@intomics.com> Senior Associate – Scientific Developer As Scientific Developer at ZS | Intomics you will use your scientific background together with your Python programming skills to build IT systems to handle biomedical data. At ZS | Intomics we collaborate closely with our clients from the pharmaceutical industry on building systems to support research and analysis of biomedical data, on discovering new drugs and biomarkers, and on finding the most effective treatments for patients. We are specialised in the analysis and integration of genomic and biomedical big data. Typical projects include data management of large amounts of data, implementing specialised processing pipelines, or designing, developing and maintaining bioinformatics tools for analysis or data presentation. We are looking for a new colleague with more focus on 'informatics' than 'bio', and with experience with biomedical data and databases in the context of bioinformatics, strong programming skills in Python and preferably other languages as well, a good understanding of how to work in a Linux environment, good communication, collaboration and documentation skills, a desire to learn about new data types and technologies, and a pragmatic approach to finding solutions. It will be an advantage to have knowledge on web programming, databases, or cloud technologies. Your workday at ZS | Intomics will be both fun and challenging. You will get the opportunity to use your experience to find the best technical solutions to meet the needs of our clients in close collaboration with your experienced and dedicated colleagues. ZS | Intomics became part of ZS after ZS acquired Intomics A/S in the spring 2022. ZS is a professional services firm that works side by side with companies to help develop and deliver products that drive customer value and company results. From R&D to portfolio strategy, customer insights, marketing and sales strategy, operations and technology, we leverage our deep industry expertise and leading-edge analytics to create solutions that work in the real world. Our most valuable asset is our people – a fact that’s reflected in our values-driven organization in which new perspectives are integral and new ideas are celebrated. ZSers are passionately committed to helping companies and their customers thrive in industries ranging from healthcare and life sciences, to high-tech, financial services, travel and transportation, and beyond. At ZS | Intomics we have world-class expertise, a strong culture, a workplace with a friendly and informal atmosphere, where you will be collaborating internationally with passionate colleagues with strong scientific backgrounds. We maintain a high degree of flexibility to keep a healthy work-life balance, ensuring a high level of employee satisfaction. You will work in a global organisation out of our Copenhagen office (Sorgenfri, Denmark). Please send your motivated application, CV and references to applications-2202 at intomics.com no later than Wednesday 22 June 2022. Applications will be reviewed on a rolling basis. -------------- next part -------------- An HTML attachment was scrubbed... URL: From coordinator at rth.dk Wed Jun 8 13:54:07 2022 From: coordinator at rth.dk (Betina Wingreen Jensen) Date: Wed, 8 Jun 2022 13:54:07 +0200 Subject: [SocBiN] 2 x postdoc positions at University of Copenhagen available (deadline: June 30) In-Reply-To: <5be220d6456f441ba2bf36c9a638f524@sund.ku.dk> References: <5be220d6456f441ba2bf36c9a638f524@sund.ku.dk> Message-ID: <003601d87b2e$75c81ab0$61585010$@rth.dk> Dear All, We have two super exciting postdoc positions available here at University of Copenhagen in the Gorodkin lab: CRISPR Bioinformatics https://employment.ku.dk/faculty/?show=156384 Computational RNA structure-based probe design https://employment.ku.dk/faculty/?show=156385 Please check them out. Application deadline: June 30th Start September 1, 2022 Best wishes, Betina Betina Wingreen Jensen Special Advisor/Project Manager University of Copenhagen Department of Veterinary and Animal Sciences Grønnegårdsvej 7 & Thorvaldsensvej 34 1870 Frederiksberg C DIR +45 35 33 47 04 MOB +45 21 51 09 32 bwj at sund.ku.dk How we protect personal data -------------- next part -------------- An HTML attachment was scrubbed... URL: -------------- next part -------------- A non-text attachment was scrubbed... Name: image003.png Type: image/png Size: 5383 bytes Desc: not available URL: From ion.petre at utu.fi Tue Jun 14 22:24:40 2022 From: ion.petre at utu.fi (Ion Petre) Date: Tue, 14 Jun 2022 20:24:40 +0000 Subject: [SocBiN] CMSB 2022: call for posters and for highlight talks References: <1d998371-3e12-4a9b-8464-043ed29a6741@Spark> Message-ID: CMSB 2022: call for posters and highlight talks ====================================== September 14-16, 2022 at the University of Bucharest, Romania CMSB 2022 website: https://fmi.unibuc.ro/en/cmsb-2022/ Accepted papers: https://fmi.unibuc.ro/en/cmsb-2022/cmsb-2022-program/ CMSB series website: https://cmsb.sciencesconf.org/ CMSB, the conference on Computational Methods in Systems Biology, aims to bring together researchers from across the biological, mathematical, computational, and physical sciences, interested in the modelling, simulation, analysis, inference, design, and control of biological systems. IMPORTANT NOTE CONCERNING THE COVID-19 PANDEMIC CMSB 2022 is planned as a physical, in-person event, with certain support for remote presence, both for speakers and for other participants who are unable or unwilling to come. INVITED SPEAKERS Alessandra Carbone (Sorbonne Université, France) Gabriela Chiosis (Memorial Sloan Kettering Cancer Center, USA) Loïc Paulevé (Laboratoire Bordelais de Recherche en Informatique, France) Alfonso Rodríguez-Patón (Universidad Politécnica de Madrid, Spain) Erik Sonnhammer (Stockholm University, Sweden) IMPORTANT DATES (all dates are AoE) Poster/highlight talk: July 14, 2022 Conference: September 14-16, 2022 PAPER SUBMISSION CMSB 2022 solicits high quality papers reporting research results and/or tools related to the topics mentioned below. In this call we solicit two types of papers: posters and highlight talks: POSTERS: Extended abstracts should be submitted to propose poster presentation of original unpublished work, or of major results published or accepted in the last year in a high-quality journal or conference. The abstracts should be submitted in Springer LNCS style and should not exceed 4 pages all included. Authors of accepted abstracts will be invited for presentation in poster sessions and for flash presentations in plenary conference sessions. Note: poster submissions will not be included in the Springer LNBI proceedings. HIGHLIGHT TALKS: Highlight talk proposals should be submitted in the form of an extended abstract, for possible oral presentation in a plenary conference session, without publication of related material in the conference proceedings. We particularly welcome submission of work recently published in high quality forums. Submitted abstracts summarizing the results and their relevance should not exceed 2 pages including references. Note: extended abstracts will not be included in the Springer LNBI proceedings. The poster and highlight talks submissions will undergo a review process with a quick turnover. Papers must be submitted electronically as PDF files via EasyChair: https://easychair.org/conferences/?conf=cmsb2022 TOPICS * formalisms for modelling biological processes; * methods and tools for biological system analysis, modelling and simulation; * frameworks for model verification, validation, analysis, and simulation of biological systems; * high-performance methods for computational systems biology; * identification of biological systems; * applications of machine learning and data analytics in biology; * network modelling, analysis, inference; * automated parameter and model synthesis; * model integration and biological databases; * multi-scale modelling and analysis methods; * design, analysis, and verification methods for synthetic biology; * methods for biomolecular computing and engineered molecular devices; * data-based approaches for systems and synthetic biology; * optimality and control of biological systems; * modelling, analysis and control of microbial communities. ORGANIZATION COMMITTEE David Pacioianu, University of Bucharest, Romania Andrei Paun, University of Bucharest, Romania (co-chair) Ion Petre, University of Turku, Finland (co-chair) Nicoleta Siminea, University of Bucharest Joel Sjöberg, University of Turku, Finland PROGRAM COMMITTEE Alessandro Abate – University of Oxford (UK) Paolo Ballarini – Centrale Supélec (France) Daniela Besozzi – University of Milan Bicocca (Italy) Luca Cardelli – University of Oxford (UK) Milan Češka – Brno University of Technology (Czech Republic) Eugenio Cinquemani – Inria Grenoble-Rhône-Alpes (France) Eugen Czeizler – University of Helsinki (Finland) Franck Delaplace – Université Paris-Saclay (France) François Fages – INRIA (France) Jerome Feret – Inria Paris (France) Clémence Frioux – Inria Bordeaux (France) Ashutosh Gupta – IIT Bombay (India) Monika Heiner – Brandenburg Technical University Cottbus-Senftenberg (Germany) Jane Hillston – University of Edinburgh (UK) Tommaso Mazza – CSS Mendel (Italy) Andrzej Mizera – University of Luxembourg (Luxembourg) Jun Pang – University of Luxembourg (Luxembourg) Nicola Paoletti – University of London (UK) Loïc Paulevé – CNRS, LaBRI (France) Andrei Paun – University of Bucharest, Romania, co-chair Ion Petre – University of Turku, Finland, co-chair Tatjana Petrov – University of Konstanz (Germany) Ovidiu Radulescu – University of Montpellier France) Andre Ribeiro – University of Tampere (Finland) Maria Rodriguez Martinez – IBM Zürich Research Laboratory (Switzerland) Olivier Roux – École Centrale de Nantes (France) David Šafránek – Masaryk University (Czech Republic) Carolyn Talcott – SRI International (USA) Jing Tang – University of Helsinki (Finland) Adelinde Uhrmacher – University of Rostock (Germany) Andrea Vandin – Technical University of Denmark (Denmark) Verena Wolf – Saarland University (Germany) Christoph Zechner – Max Planck Institute of Molecular Cell Biology and Genetics (Germany) TOOL EVALUATION COMMITTEE Georgios Argyris – Technical University of Denmark, Copenhagen (Denmark) Candan Çelik – Comenius University, Bratislava (Slovakia) Anastasis Georgoulas – University College London (UK) Lukrécia Mertová – Heidelberg Institute for Theoretical Studies (Germany) Samuel Pastva – IST Austria (Austria) Misbah Razzaq – INRAe, Tours (France) David Šafránek – Masaryk University (Czech Republic), chair Jakub Šalagovič – KU Leuven (Belgium) Matej Trojak – Masaryk University (Czech Republic) STEERING COMMITTEE Luca Cardelli – University of Oxford (UK) François Fages – INRIA (France) Monika Heiner – Brandenburg Technical University Cottbus-Senftenberg (Germany) Tomasso Mazza – CSS Mendel (Italy) Satoru Miyano – University of Tokyo (Japan) Ion Petre – University of Turku, Finland Gordon Plotkin – University of Edinburgh (UK) Corrado Priami – University of Pisa (Italy) Carolyn Talcott – SRI International (USA) Adelinde Uhrmacher – University of Rostock (Germany) Alessandro Abate – University of Oxford (UK) Eugenio Cinquemani – Inria Grenoble-Rhône-Alpes (France) Jun Pang – University of Luxembourg (Luxembourg) Loïc Paulevé – CNRS, LaBRI (France) Andrei Paun – University of Bucharest, Romania Tatjana Petrov – University of Konstanz (Germany) Verena Wolf – Saarland University (Germany) CONTACT All questions about the conference should be emailed to the organizers Ion Petre (ion.petre at utu.fi) and Andrei Paun (apaun at fmi.unibuc.ro). -------------- next part -------------- An HTML attachment was scrubbed... URL: From arne at bioinfo.se Thu Jun 16 19:30:40 2022 From: arne at bioinfo.se (Arne Elofsson) Date: Thu, 16 Jun 2022 19:30:40 +0200 Subject: [SocBiN] Fwd: 3D-BioInfo notice - AlphaFold webinars In-Reply-To: References: <006C169C-6050-4A31-9DFC-0539F2006D74@ebi.ac.uk> Message-ID: ---------- Forwarded message --------- From: Orengo, Christine Date: Thu, 16 Jun 2022, 15:57 Subject: 3D-BioInfo notice - AlphaFold webinars To: 3d-bioinfo-all-contacts <3d-bioinfo-all-contacts at live.ucl.ac.uk> Dear All Just to notify you of a series of AlphaFold webinars being held by the 3D-BioInfo Community together with eTraining at EBI. The first one was very popular - we hope you will be interested. Videos can also be downloaded afterwards from the website given below. Best Wishes Christine ------------------------------ *From:* Ajay Mishra *Sent:* 16 June 2022 14:19 *To:* Orengo, Christine *Cc:* sameer at ebi.ac.uk ; Marta Lloret Llinares < marta.lloret at ebi.ac.uk> *Subject:* AlphaFold webinars ⚠ Caution: External sender Dear Christine, Our first webinar of AlphaFold series ran this week and it was very well received and now the recording is available to watch for this - https://www.ebi.ac.uk/training/events/scope-and-vision-alphafold/ I was just wondering if you could help to promote the next two webinars of this series which will be running on the 21st and 28th June? - Impact of AlphaFold on teaching and training in life sciences - Impact of AlphaFold on research and development 3D-Bioinfo community has been tagged into our webinar pages as well as in our twitter messages. However, it would be great if you could share the webinars with your other networks by email or social platforms. Thank you Best wishes Ajay ………………………………………………… Dr Ajay Mishra Scientific Training Officer - e-learning Pronouns: him/he European Bioinformatics Institute (EMBL-EBI) Wellcome Genome Campus, Hinxton Cambridge CB10 1SD United Kingdom www.ebi.ac.uk/training | @EBItraining You're receiving this message because you're a member of the 3d-bioinfo-all-contacts group from University College London. To take part in this conversation, reply all to this message. View group files | Leave group | Learn more about Microsoft 365 Groups -------------- next part -------------- An HTML attachment was scrubbed... URL: -------------- next part -------------- A non-text attachment was scrubbed... Name: image002.png Type: image/png Size: 150036 bytes Desc: not available URL: -------------- next part -------------- A non-text attachment was scrubbed... Name: image002.png Type: image/png Size: 150036 bytes Desc: not available URL: From henrik.lantz at nbis.se Thu Jun 23 14:46:31 2022 From: henrik.lantz at nbis.se (Henrik Lantz) Date: Thu, 23 Jun 2022 14:46:31 +0200 Subject: [SocBiN] Three permanent bioinformatician positions in genome assembly and evolutionary genomics in Sweden Message-ID: <236FAF47-4A35-4B01-BBCC-6E36DA10DB0F@nbis.se> Dear all, NBIS (National Bioinformatics Infrastructure Sweden) now has three bioinformatician positions available, all with application deadline August 15. All three positions are permanent, all placed at Uppsala University in Sweden. NBIS is built up of 120 highly talented bioinformaticians, system developers, and data stewards, all working to support Swedish researchers. We also have a strong international component with a lot of collaboration in European projects, not the least through ELIXIR where NBIS also constitutes the Swedish node (ELIXIR-SE) . We are now in an expansive phase and need to strengthen in particular our support teams. NBIS is a great place to learn and grow as a bioinformatician, with hundreds of exciting projects every year and a lot of support available from highly talented colleagues, and we are now hoping to add even more talent to our teams! 1-2 positions focus on genome assembly, in Swedish projects or in international projects in the European Reference Genome Atlas (ERGA) consortium. 1 position focuses on evolutionary and comparative genomic analyses on large genomes. Please note that these are not post doc positions, they are permanent staff scientist positions with the main responsibility to support research or infrastructure projects. Please see below for more information and how to apply. Note that we do not accept applications via email, please use the links provided in the webpages linked below: 1-2 positions in genome assembly: https://www.uu.se/en/about-uu/join-us/details/?positionId=518948 1 position in evolutionary genomics: https://www.uu.se/en/about-uu/join-us/details/?positionId=518909 Please see contact details in the advertisements if you have any questions about the positions. Kind regards, Henrik ———————— Henrik Lantz Support manager, NBIS Uppsala, Sweden -------------- next part -------------- An HTML attachment was scrubbed... URL: From laurent.guyon at cea.fr Fri Jun 24 17:24:04 2022 From: laurent.guyon at cea.fr (GUYON Laurent) Date: Fri, 24 Jun 2022 15:24:04 +0000 Subject: [SocBiN] Virtual seminar of Cynthia Sharma - mechanisms/functions of small RNAs in bacteria, 4th of July - 4pm CET Message-ID: Dear colleagues, In the framework of the small non-coding RNA bioinformatics club (https://smallrna-bioinformatics.eu/), we are happy to share with you the seminar of Cynthia Sharma related to mechanisms/functions of small RNAs in bacteria. Caution: the seminar will not be recorded this time. More information here and below (including future seminars): https://smallrna-bioinformatics.eu/Pages/Seminars/S22_07.aspx Start Monday July 4th at 4pm (CET, Berlin/Paris) (3 pm London/Lisbon, 10am New-York, 7am San Francisco, 5pm Tel Aviv) Link to the Zoom conference: https://univ-grenoble-alpes-fr.zoom.us/j/93609306988?pwd=SWdvS1RPc0oxbDRRai9GUmpKN0t0dz09 Link to the YouTube stream: https://www.youtube.com/watch?v=VYIKBJq_coM Main Speaker: Cynthia Sharma, Professor, Institute of Molecular Infection Biology (IMIB), University of Würzburg, Germany (Link) Title: Regulatory RNAs in pathogenic Epsilonproteobacteria Abstract: Non-coding RNAs and RNA-protein (RNP) complexes play central roles in diverse physiological processes in all kingdoms of life. Research in our lab focuses on RNA-based processes in the two pathogenic Epsilonproteobacteria Helicobacter pylori, the cuasative agent of gastric cancer, and the related food-borne pathogen Campylobacter jejuni. We are especially interested in the roles of small, regulatory RNAs (sRNAs) and RNPs in virulence control as well as novel mechanisms of gene regulation. For example, we have discovered new connections between so-called phase-variation at length variable DNA repeats and post-transcriptional regulation. I will present our work on sRNAs from H. pylori and C. jejuni that target variable G-repeats and regulate genes involved in host colonization as well as antibiotic sensitivity. Moreover, we recently identified a sRNA that is itself regulated by a phase-variable repeat and acts as a central regulator of the major virulence factors of H. pylori. Short session speaker (8 minutes long): Fabian König Title: A 3´UTR-derived, processed small RNA modulates flagellar biogenesis by repression of the anti-sigma factor FlgM in Campylobacter jejuni Abstract: In Campylobacter jejuni, as for many pathogens, flagella are a crucial virulence factor, enabling traversal through the viscous mucus layer of the human intestine. Flagellar biogenesis is known to involve hierarchical transcriptional control of each component, with class I genes transcribed from sigma-70-dependent promoters, and class II and class III genes transcribed with the help of alternative sigma factors, RpoN and FliA, respectively. In contrast to transcriptional control, less is known about post-transcriptional regulation of flagellar biosynthesis cascades by small regulatory RNAs (sRNAs). Here, we have characterized a conserved Campylobacter sRNA, CJnc230, encoded downstream of the RpoN-dependent flagellar hook structural protein FlgE, and found that three ribonucleases are involved in sRNA maturation. RNase III cleaves off the sRNA from the flgE mRNA, while RNase Y and PNPase process CJnc230 at its 3´ end. We identified a regulator of flagella-flagella interactions as well as the anti-sigma-28 factor FlgM as targets of CJnc230 repression. CJnc230 overexpression led to de-repression of FliA and subsequent upregulation of class III flagellar genes such as the major flagellin flaA, culminating in an increase in motility and flagellar length. Overexpression of the FliA-dependent sRNA CJnc170 instead led to reduced motility suggesting sRNA-mediated regulation of C. jejuni flagellar biosynthesis through balancing of the hierarchically expressed components. The club propose seminars every two months. Abstracts and links for the seminars are available here: https://smallrna-bioinformatics.eu/Pages/Seminars/Seminars.aspx Tweet for easy re-transmission: https://twitter.com/Laurent_Guyon/status/1540352879780892672 YouTube channel (most of the seminars are then shared through this channel, but not this one): https://www.youtube.com/channel/UCTiHtqOKzneeqIqauQMgx3A Seminars are given at 4pm CET, except in rare cases. - 4 July 2022 - Cynthia Sharma - mechanisms/functions of small RNAs in bacteria - 10 October 2022 (updated) - Marc Friedländer - miRNA-target interactions in single cells - 7 November 2022 - Amy Buck - Dr Buck is working in the field of microRNA-virus interactions 'hope to see you virtually in these seminars, Laurent Guyon, on behalf of all the organizers (Rolf Backofen, Ana Eulálio, Bastian Fromm, Laurent Guyon, Andreas Keller, Marie-France Sagot) ____________________________ Laurent GUYON, PhD, HDR - Bioinformatics CEA IRIG (Interdisciplinary Research Institute of Grenoble) BioHealth Department - BCI (Biology of Cancer and Infection laboratory) UMR 1292 CEA/Inserm/Université Grenoble Alpes CEA Grenoble - Bât C3 - Bureau 224 17 rue des Martyrs - 38054 GRENOBLE Cedex 9 - France Tél : (+33)4.38.78.04.53 - Fax : (+33)4 38 78 50 58 Email : laurent.guyon at cea.fr - http://laurent.guyon.phd.free.fr/ Interested by small non-coding RNA bioinformatics? Join the club! https://smallrna-bioinformatics.eu/ Special issue on small non-coding RNA bioinformatics, submit before the 15th of October (updated - contact me if you need delay): https://www.mdpi.com/journal/genes/special_issues/Small_RNA_Bioinformatics Happy to share miRViz (free to use website to analyze your microRNA datasets): http://mirviz.prabi.fr/ Article: https://doi.org/10.1093/nar/gkaa259 Messages of the paper: https://twitter.com/Laurent_Guyon/status/1255487510563651586 -------------- next part -------------- An HTML attachment was scrubbed... URL: From jeanette.tangrot at umu.se Mon Jun 27 14:30:13 2022 From: jeanette.tangrot at umu.se (=?iso-8859-1?Q?Jeanette_T=E5ngrot?=) Date: Mon, 27 Jun 2022 12:30:13 +0000 Subject: [SocBiN] Registration is open for SBW2022 Message-ID: <796c23a4d6e74283ac63bdd3e7113794@umu.se> Dear all, Registration is now open for the 2022 edition of the Swedish Bioinformatics Workshop (SBW)! This year it will take place at Umeå University the 27-28th October. The two days will be filled with inspiring talks, including keynote talks by Kerstin Lindblad-Toh (Uppsala University/Broad Institute), Debora S. Marks (Harvard University), and Simon Anders (Heidelberg University). There will also be three parallel hands-on workshops, a poster session, and a social event. The target group is traditionally PhD students and postdocs working with any kind of bioinformatics and computational biology. This workshop aims to bring together talented students and young researchers across faculties and universities from throughout the country. See www.sbw2022.com for registration and more information. Registration is free for PhD students and postdocs. Best regards, Jeanette Tångrot On behalf of the SBW 2022 organising committee --------------------------------------------------------------------------------------------------------------- Jeanette Tångrot, PhD NBIS - National Bioinformatics Infrastructure Sweden Institutionen för molekylärbiologi / Department of Molecular Biology Umeå universitet / Umeå University SE-901 87 Umeå, Sweden +46-90-785 67 60 jeanette.tangrot at umu.se, jeanette.tangrot at nbis.se När du skickar e-post till Umeå universitet så innebär detta att Umeå universitet behandlar dina personuppgifter. För att läsa mer om hur detta går till, gå till www.umu.se/gdpr By sending an email to Umeå University, the University will need to process your personal data. For more information, please read www.umu.se/en/gdpr -------------- next part -------------- An HTML attachment was scrubbed... URL: From coordinator at rth.dk Thu Jun 30 11:45:23 2022 From: coordinator at rth.dk (Betina Wingreen Jensen) Date: Thu, 30 Jun 2022 11:45:23 +0200 Subject: [SocBiN] (July 31 -deadline) Post doc in CRISPR Bioinformatics and Postdoc in Computational RNA structure-based probe design Message-ID: <001101d88c66$1e9a2140$5bce63c0$@rth.dk> Dear All, We have two super exciting postdoc positions available here at the University of Copenhagen in the Gorodkin lab. For more information and instructions on how to apply, please click on the links below: Postdoc in CRISPR Bioinformatics https://employment.ku.dk/faculty/?show=156384 Postdoc in Computational RNA structure-based probe design https://employment.ku.dk/faculty/?show=156385 Application deadline: July 31, 2022 Start date: October 1, 2022 Best wishes, Betina Betina Wingreen Jensen Special Advisor/Project Manager University of Copenhagen Department of Veterinary and Animal Sciences Grønnegårdsvej 7 & Thorvaldsensvej 34 1870 Frederiksberg C DIR +45 35 33 47 04 MOB +45 21 51 09 32 bwj at sund.ku.dk How we protect personal data -------------- next part -------------- An HTML attachment was scrubbed... URL: -------------- next part -------------- A non-text attachment was scrubbed... Name: image003.png Type: image/png Size: 5383 bytes Desc: not available URL: