From kimleeng at gmail.com Mon May 1 09:57:32 2023 From: kimleeng at gmail.com (Kim Ng) Date: Mon, 1 May 2023 09:57:32 +0200 Subject: [SocBiN] Systems administrator job positions (SSI, Copenhagen Denmark) Deadline 11-05-23 Message-ID: Hi All, I am writing to share a job opening at Statens Serum Institut (national public health institute for Denmark). We are looking for a systems administrator who will be involved in research data infrastructure. The ideal candidate will be proficient in Linux, storage systems, with experience in HPC and cloud environments. They should also have a passion for creating and maintaining scalable, reliable, and secure infrastructure for scientific research. If you know of anyone who might be interested in this position, please feel free to forward this email along to them. More information about the position and how to apply can be found on our website: https://candidate.hr-manager.net/ApplicationInit.aspx?cid=5001&ProjectId=168295&DepartmentId=9178&MediaId=2801 Thank you for your time, and please let me know if you have any questions. Kind regards, -Kim Ng -------------- next part -------------- An HTML attachment was scrubbed... URL: From laurent.guyon at cea.fr Tue May 16 10:42:53 2023 From: laurent.guyon at cea.fr (GUYON Laurent) Date: Tue, 16 May 2023 08:42:53 +0000 Subject: [SocBiN] Free virtual seminars about microRNAs in differentiation and in aging, this Monday Message-ID: <8da5088484de4df5b3dae65478a25433@cea.fr> Dear colleagues, In the framework of the small non-coding RNA bioinformatics club (https://smallrna-bioinformatics.eu/), we are programming 2 great seminars of large interest for the upcoming Monday, dealing with microRNAs in differentiation and in aging. *Monday the 3rd of April at 4pm (Berlin/Paris time, 10am in Boston)* Links to connect (you can choose zoom, which enables questions or YouTube): https://smallrna-bioinformatics.eu/Pages/Seminars/S23_05.aspx We will listen to Daniel Cifuentes, with a short talk of Viktoria Wagner (from the lab of Andreas Keller). The club proposes seminars every two months. Stay tuned and inscribe to the mailing list (rare emails): https://smallrna-bioinformatics.eu/Pages/_PAGES/Mailing-List.aspx See you virtually very soon! Laurent Guyon PS: tweet for easy retransmission: https://twitter.com/Laurent_Guyon/status/1658149628397666304 ____________________________ Laurent GUYON, PhD, HDR - Bioinformatics CEA IRIG (Interdisciplinary Research Institute of Grenoble) BioHealth laboratory UMR 1292 CEA/Inserm/Université Grenoble Alpes CEA Grenoble - Bât C3 - Bureau 304c 17 rue des Martyrs - 38054 GRENOBLE Cedex 9 - France Tél : (+33)4.38.78.36.91 - Fax : (+33)4 38 78 50 58 Email : laurent.guyon at cea.fr - http://laurent.guyon.phd.free.fr/ Interested by small non-coding RNA bioinformatics? Join the club! https://smallrna-bioinformatics.eu/ **Post-doc position available in 2023** for a project in bioinformatics related to microRNA in cancer at the single cell level. Feel free to contact me for more information. Happy to share miRViz (free to use website to analyze your microRNA datasets): http://mirviz.prabi.fr/ Article: https://doi.org/10.1093/nar/gkaa259 Messages of the paper: https://twitter.com/Laurent_Guyon/status/1255487510563651586 -------------- next part -------------- An HTML attachment was scrubbed... URL: From laurent.guyon at cea.fr Tue May 16 10:49:33 2023 From: laurent.guyon at cea.fr (GUYON Laurent) Date: Tue, 16 May 2023 08:49:33 +0000 Subject: [SocBiN] Free virtual seminars about microRNAs in differentiation and in aging, this Monday In-Reply-To: <28760_1684226590_6463421D_28760_19787_1_8da5088484de4df5b3dae65478a25433@cea.fr> References: <28760_1684226590_6463421D_28760_19787_1_8da5088484de4df5b3dae65478a25433@cea.fr> Message-ID: <00f9e244ea584201a467eadaab2ffad7@cea.fr> Sorry, my bad, the seminar is this upcoming Monday, so *Monday the 22nd of May at 4pm (Berlin/Paris time, 10am in Boston)* Links to connect (you can choose zoom, which enables questions or YouTube): microRNAs in differentiation and in aging https://smallrna-bioinformatics.eu/Pages/Seminars/S23_05.aspx ____________________________ Laurent GUYON, PhD, HDR - Bioinformatics CEA IRIG (Interdisciplinary Research Institute of Grenoble) UMR 1292 BioHealth laboratory Bât C3 - Bureau 304c (+33)4.38.78.36.91 http://laurent.guyon.phd.free.fr/ De : SocBiN De la part de GUYON Laurent Envoyé : mardi 16 mai 2023 10:43 À : socbin at sbc.su.se Objet : [PROVENANCE INTERNET] [SocBiN] Free virtual seminars about microRNAs in differentiation and in aging, this Monday Dear colleagues, In the framework of the small non-coding RNA bioinformatics club (https://smallrna-bioinformatics.eu/), we are programming 2 great seminars of large interest for the upcoming Monday, dealing with microRNAs in differentiation and in aging. *Monday the 3rd of April at 4pm (Berlin/Paris time, 10am in Boston)* Links to connect (you can choose zoom, which enables questions or YouTube): https://smallrna-bioinformatics.eu/Pages/Seminars/S23_05.aspx We will listen to Daniel Cifuentes, with a short talk of Viktoria Wagner (from the lab of Andreas Keller). The club proposes seminars every two months. Stay tuned and inscribe to the mailing list (rare emails): https://smallrna-bioinformatics.eu/Pages/_PAGES/Mailing-List.aspx See you virtually very soon! Laurent Guyon PS: tweet for easy retransmission: https://twitter.com/Laurent_Guyon/status/1658149628397666304 ____________________________ Laurent GUYON, PhD, HDR - Bioinformatics CEA IRIG (Interdisciplinary Research Institute of Grenoble) BioHealth laboratory UMR 1292 CEA/Inserm/Université Grenoble Alpes CEA Grenoble - Bât C3 - Bureau 304c 17 rue des Martyrs - 38054 GRENOBLE Cedex 9 - France Tél : (+33)4.38.78.36.91 - Fax : (+33)4 38 78 50 58 Email : laurent.guyon at cea.fr - http://laurent.guyon.phd.free.fr/ Interested by small non-coding RNA bioinformatics? Join the club! https://smallrna-bioinformatics.eu/ **Post-doc position available in 2023** for a project in bioinformatics related to microRNA in cancer at the single cell level. Feel free to contact me for more information. Happy to share miRViz (free to use website to analyze your microRNA datasets): http://mirviz.prabi.fr/ Article: https://doi.org/10.1093/nar/gkaa259 Messages of the paper: https://twitter.com/Laurent_Guyon/status/1255487510563651586 -------------- next part -------------- An HTML attachment was scrubbed... URL: From lukas.kall at scilifelab.se Wed May 17 14:50:56 2023 From: lukas.kall at scilifelab.se (=?UTF-8?Q?Lukas_K=C3=A4ll?=) Date: Wed, 17 May 2023 14:50:56 +0200 Subject: [SocBiN] Ph.D. position in Computational Biology and Machine Learning at SciLifeLab Message-ID: We have an opening for a Ph.D. Student in Computational Biology and Machine Learning. Please forward this ad to anyone that might be interested. http://kaell.org/wp-content/uploads/phd_student.pdf Yours, --Lukas Käll Professor of Applied Systems Biology, KTH -------------- next part -------------- An HTML attachment was scrubbed... URL: From arne.elofsson at gmail.com Tue May 23 17:07:22 2023 From: arne.elofsson at gmail.com (Arne Elofsson) Date: Tue, 23 May 2023 17:07:22 +0200 Subject: [SocBiN] EMBO courses Message-ID: These courses/Workshops can be of interest to you (I am teaching in them) Integrative modelling of protein interactions 17 – 22 September 2023 | Izmir, Türkiye https://meetings.embo.org/event/23-biomolecular-interactions Computational structural biology 6 - 9 Dec 2023. EMBL Heidelberg https://www.embl.org/about/info/course-and-conference-office/events/csb23-01/ AI and biology 12 - 15 Mar 2024 EMBL Heidelberg https://www.embl.org/about/info/course-and-conference-office/events/ees24-01/ Yours Yours Arne ----------------------------------------- Arne Elofsson Science for Life Laboratory Tel:+46-(0)70 695 1045 Stockholm University http://bioinfo.se/ Box 1031, Email: arne at bioinfo.se 17121 Solna, Sweden Twitter: @arneelof Mastodon: @arneelof at fediscience.org Zoom: https://stockholmuniversity.zoom.us/my/arneelof/ Scholar: http://scholar.google.se/citations?user=s3OCM3AAAAAJ ORCID: 0000-0002-7115-9751 -------------- next part -------------- An HTML attachment was scrubbed... URL: From Fredrik.Ronquist at nrm.se Wed May 24 06:50:29 2023 From: Fredrik.Ronquist at nrm.se (Fredrik Ronquist) Date: Wed, 24 May 2023 04:50:29 +0000 Subject: [SocBiN] Researcher, Biodiversity Impact Analysis Message-ID: Researcher, Biodiversity Impact Analysis The Department of Bioinformatics and Genetics at the Swedish Museum of Natural History is looking for a researcher focused on biodiversity impact analysis. The position will be placed in the Ronquist lab (https://ronquistlab.github.io/). You will work within the MISTRA-funded research project Finance to Revivie Biodiversity (https://finbio.org), led by Stockholm Resilience Centre (https://stockholmresilience.org/). You will be developing and evaluating different methods of assessing and analyzing the impact of private corporations and government agencies on biodiversity. The project runs until 2026-12-13, and if successful can be extended for four years after that. Questions about the position can be directed to Fredrik Ronquist (fredrik.ronquist at nrm.se), Mats Töpel (mats.topel at ivl.se) or FinBio Program Director Garry Peterson (garry.peterson at su.se). More info and application here: https://www.nrm.se/ommuseet/jobbahososs/ledigatjanster.9005019.html. Application deadline June 19 -------------- next part -------------- An HTML attachment was scrubbed... URL: From Joana.Goncalves at tudelft.nl Sat May 27 17:09:57 2023 From: Joana.Goncalves at tudelft.nl (=?utf-8?B?Sm9hbmEgZGUgUGluaG8gR29uw6dhbHZlcw==?=) Date: Sat, 27 May 2023 15:09:57 +0000 Subject: [SocBiN] Two PhD/Postdoc research positions at Delft University of Technology Message-ID: <3EBEAC78-2E88-447B-83F4-9CCC1EC72E0B@tudelft.nl> Dear all, I have two openings for the following research positions, both with application deadline of 18 June 2023 (ongoing selection): * PhD or Postdoc on multimodal machine learning for molecular maps of human tissue in health & disease. Some topics of interest include (spatial) (single-cell) multi-omics integration, multimodal signature learning, cross-modality prediction, interpretability and explainability of multimodal ML, and more. The position involves close collaboration with multiple pathology and experimental labs in the US, with extensive expertise on spatial omics technologies (e.g. imaging mass spectrometry, sequence-based spatial transcriptomics), providing you with insight into the latest technologies. The position further interfaces with the large-scale consortia, including the Human BioMolecular Atlas Program (https://hubmapconsortium.org/), Kidney Predicion Medicine Project (https://www.kpmp.org/), and a Brain/Aging consortium). Read more and apply at https://www.academictransfer.com/en/328385/phd-or-postdoc-multimodal-machine-learning-for-molecular-maps-of-human-tissue/. * PhD on computational methods to uncover genetic diversity in complex disease from data acquired for large-scale cell "villages" of human donors coupled with single-cell molecular profiling. The position fits within a larger consortium, the iCELL Convergence Flagship, which I am co-leading (https://convergence.nl/flagship-convergence-in-a-dish/). The research of this particular position requires close collaboration with experts in molecular biology, stem cell research, and genetics at the Erasmus Medical Center in Rotterdam, Netherlands. Read more and apply at https://www.academictransfer.com/en/328386/phd-position-on-icell-individualized-cellular-modules-of-disease-diversity-in-the-population/. Both positions are full-time and based in the beautiful city of Delft, in the Netherlands. Check out our Computational Molecular Biomedicine lab (https://goncalveslab.tudelft.nl/people.html) at the Delft University of Technology. We are part of the Pattern Recognition and Bioinformatics section, offering an inspiring research environment in data science and machine learning. Do not hesitate to get in touch in case you would like more information! -- Joana Gonçalves Assistant Professor TU Delft | EEMCS Faculty | Computer Science INSY Department | Pattern Recognition & Bioinformatics Meet (Zoom): https://tudelft.zoom.us/my/joanagoncalves Web: https://goncalveslab.tudelft.nl -------------- next part -------------- An HTML attachment was scrubbed... URL: