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<font size="4" class="">Open position as Data Engineer within AI and microscopy</font></h1>
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We have an open 2-year position as Data Engineer in the Spjuth research group (<a href="https://pharmb.io/" class="">https://pharmb.io/</a>) at Uppsala University / SciLifeLab. </p>
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<font size="4" class="">Tasks</font></h2>
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In collaboration with other researchers, develop, implement and test systems for AI-controlled automated microscopes. The task includes interacting directly with the microscope and establishing pipelines where models trained on previously taken images decide
and control where the microscope should take images in the next step to reach a specific goal. We are looking for a candidate with a genuine interest in technology and automation, and who enjoys solving problems including both practical interaction with hardware
(robots, microscopes) and different types of software. Since our microscopes generate large amounts of images, the position will also include large-scale data management and -analysis. You will work with researchers in AI modeling and biological laboratory
sciences, and contribute to implementing methods and evaluating them for different types of biological problems.</p>
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This is a 2-year position that is part of the HASTE project, funded by the Swedish Foundation for Strategic Research (SSF) aiming at developing new, intelligent ways of processing and managing very large amounts of microscopy images in order to be able to leverage
the imminent explosion of image data from modern experimental setups in the biosciences. Industry collaborators are Vironova AB and AstraZeneca AB. More information about the HASTE project is available at <a href="http://haste.research.it.uu.se/" style="box-sizing: border-box; background-color: transparent; color: rgb(204, 0, 0); text-decoration: none;" class="">http://haste.research.it.uu.se</a></p>
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<font size="4" class="">Qualifications</font></h2>
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A master’s degree in engineering or a university degree in a relevant field is a requirement. Good programming skills in Python and preferably more programming languages is a requirement. Experience in AI modeling, Linux systems as well as developing REST services
and APIs is a requirement. Experience of AI modeling on image data, practical handling of automated microscopes and working with software containers (e.g. Docker/Singularity) is meriting.</p>
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<strong style="box-sizing: border-box;" class="">Deadline to apply: Nov 25th, 2020.</strong></p>
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<strong style="box-sizing: border-box;" class="">Link to Uppsala University job site:</strong> <a href="https://uu.se/en/about-uu/join-us/details/?positionId=361223" style="box-sizing: border-box; background-color: transparent; color: rgb(204, 0, 0); text-decoration: none;" class="">https://uu.se/en/about-uu/join-us/details/?positionId=361223</a></p>
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<div class="">Ola Spjuth, Professor</div>
<div class=""><span style="text-align: -webkit-auto;" class="">Department of Pharmaceutical Biosciences</span></div>
<div class=""><span style="text-align: -webkit-auto;" class="">Director of Studies, Pharmaceutical Bioinformatics</span></div>
<div class="">Box 591, Uppsala University, Uppsala, <span style="text-align: -webkit-auto;" class="">Sweden</span></div>
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<div class=""><a href="mailto:ola.spjuth@farmbio.uu.se" class="">Email: ola.spjuth@farmbio.uu.se</a></div>
<div class="">Ph: +46 (0)70 425 06 28</div>
<div class="">Web: <a href="https://pharmb.io" class="">https://pharmb.io</a></div>
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