[Funcoup] KEGG pathways broken (?)

[Andrey Alexeyenko]

Yes, they are simply not in the synonyms table yet :(

The last time I mentioned it was related to the question:
how we should limit such groups as KEGG or GO?
I suggested that only groups with <100 genes can be queried.

Whatever was the answer, I never was back to that, so this still has to 
be done (together with GO, maybe something else?)

Indiv. genes must work. Note that they never work with distance set to 0.

Andrey


On 2011-10-13 14:44, Erik Sonnhammer wrote:
> Alternatively, something is broken with the magenta nodes.  Even when
> moving gene ids from the yellow to the magenta I get zilch magenta nodes
> in the output.
>
> /Erik
>
> On 10/13/2011 02:40 PM, Erik Sonnhammer wrote:
>> Andrey, either I forgot how to use it or it is broken, but I can't seem
>> to get the KEGG pathways to work on the website.  If I put any KEGG id,
>> e.g. KEGG00010 in the yellow box it just says.
>>
>> "The database does not contain the identifier(s) you have submitted.
>> Please try other synonyms. "
>>
>> If I put real queries in the yellow box and pathways I know they are
>> linked to in the magenta box, I get no magenta nodes.
>>
>> /Erik
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