[Inparanoid] Slow Analysis

Adrian Pelin apelin20 at gmail.com
Thu Feb 19 19:57:11 CET 2015


I noticed inparanoid has not been updated to work with the new 
NCBI-Blast and still uses legacy blast. I was wondering if there was a 
way to tweak the code to use the new blast, since it's much faster. I am 
trying to find orthologues between a fish species and zebrafish, and 
it's been on the first step for a few days now where it blasts zebrafish 
against zebrafish.


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