[Inparanoid] INPARANOID BLAST search

[Erik Sonnhammer]

Hi, that is just a regular Blast search to find the protein you are 
looking for.

Erik

On 10/29/2016 11:54 AM, fritz.franz at gmx.net wrote:
> Hi,
> I have a question concerning the InParanoid8 Blast search option on 
> the web page.
> Is this just a regular BLAST search or is this already somehow using 
> the Inparanoid algorithm or a bi-directional Blast search?
> I realized that I get different results with the same protein by using 
> the "Gene search" option and entering the protein ID or by using the 
> "Blast" option and pasting the protein sequence. According to the FAQ 
> both options should deliver orthologs. Is this really the case for the 
> "Blast" option?
> Thank you very much for your help!
> Fritz
>
>
> _______________________________________________
> InParanoid-at-sbc.su.se mailing list
> InParanoid-at-sbc.su.se at lists.su.se
> https://lists.su.se/mailman/listinfo/inparanoid-at-sbc.su.se


-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://lists.su.se/pipermail/inparanoid-at-sbc.su.se/attachments/20161031/65026287/attachment.html>