[Primeusers] Problem running primeGSR

Jacky Hess jacky at ebi.ac.uk
Thu Jun 10 13:27:02 CEST 2010


Hi,

I hadn't managed to find a way around it at the time but I am starting 
to look at it again and would be interested to hear if anyone found a 
solution to this as well.

Best,
Jacky

On 08/04/2010 12:18, James Cotton wrote:
> Hi,
>
> We've finally got primeGSR running on our data, but we now seem to
> have an MCMC that does not move at all, so the posterior for every
> parameter consists of a single value, and only a single tree is sampled.
>
> We get error messages that are the same as those reported by Jacky
> Hess on Tue Sep 29 11:38:56 CEST 2009 - lots of 'Tried to set length
> of node' messages.
>
> I'm wondering if Jacky or anyone else on the forum has managed to fix
> this kind of problem, and if so, how!
>
> Thanks
> James Cotton
> '
> _____________________________________________
> James Cotton
> School of Biological and Chemical Sciences
> Queen Mary, University of London
> +44 (0)207 882 3645
> j.a.cotton at qmul.ac.uk
> http://webspace.qmul.ac.uk/jacotton/index.html
> http://www.sbcs.qmul.ac.uk/staff/jamescotton.html
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