From henrik.lantz at bils.se Mon Aug 1 12:51:57 2016 From: henrik.lantz at bils.se (Henrik Lantz) Date: Mon, 1 Aug 2016 12:51:57 +0200 Subject: [SocBiN] Position available in annotation team at Ensembl Message-ID: Please see link below provided by Fergal Martin at Ensembl. Best, Henrik Henrik Lantz NBIS/SciLifeLab/Uppsala University Sweden ------------- Hi Henrik, Hope all is well with you and the rest of the team. We’re looking to expand the gene annotation team here at Ensembl and I was wondering if you could pass the job ad on to anyone you think might be interested: http://www.embl.de/jobs/searchjobs/index.php?ref=EBI_00776&newlang=1 All the best, Fergal. -------------- next part -------------- An HTML attachment was scrubbed... URL: From cstorm at birc.au.dk Tue Aug 2 09:02:45 2016 From: cstorm at birc.au.dk (Christian Storm Pedersen) Date: Tue, 2 Aug 2016 07:02:45 +0000 Subject: [SocBiN] WABI 2016 - Final Call for Posters - Deadline, Aug 10 Message-ID: <2FEB29A7-BFF0-4DB9-BC09-B1B00BA9234F@birc.au.dk> =================================================================== Call for Posters - WABI 2016 - Submission deadline Aug 10, 2016 16th Workshop on Algorithms in Bioinformatics August 22-24, 2016. Aarhus, Denmark http://conferences.au.dk/algo16/wabi =================================================================== Scope: All research in algorithmic work in bioinformatics, computational biology and systems biology. The emphasis is mainly on discrete algorithms and machine-learning methods that address important problems in molecular biology, that are founded on sound models, that are computationally efficient, and that have been implemented and tested in simulations and on real datasets. The goal is to present recent research results, including significant work-in-progress, and to identify and explore directions of future research. Poster Submission: We invite researchers to submit their latest results that fall into the general area of algorithms in bioinformatics in the form of a poster. Therefore they are requested to submit an abstract that will be included in the conference package handed out at the workshop. A poster abstract must be in plain text and no longer than 500 words, not including bibliographic references. The submission form can be found via: http://conferences.au.dk/algo16/wabi/call-for-posters/ Poster submission deadline: Wednesday, August 10, 2016. Notification of poster acceptance: Monday, August 15, 2016. Workshop: August 22-24, 2016 The poster session will be in the afternoon of Tuesday, August 23. The format will be A0 vertical (84cm=33.1" wide, 118cm=46.8" high). At least one author of each accepted poster is required to register for and attend the workshop. -- Christian Nørgaard Storm Pedersen Bioinformatics Research Center (BiRC), Aarhus University http://www.birc.au.dk/~cstorm From J.deRidder-4 at umcutrecht.nl Tue Aug 2 12:45:32 2016 From: J.deRidder-4 at umcutrecht.nl (Jeroen de Ridder) Date: Tue, 2 Aug 2016 10:45:32 +0000 Subject: [SocBiN] Bioinformatics PhD or Postdoc position at UMC Utrecht Message-ID: <20CCD43B-6D72-4386-919B-459BEF22AD89@umcutrecht.nl> I am looking for a talented PhD student or Postdoc to work on bioinformatics approaches for SV detection and interpretation. For more information: http://www.werkenbijumcutrecht.nl/vacatures/Paginas/phd-student-or-postdoc-in-group-de-ridder%20(2016-0644).aspx -- Jeroen de Ridder, Ph.D. Associate Professor / Principle Investigator University Medical Center Utrecht Centre for Molecular Medicine Universiteitsweg 100, STR 1.305 3584 CG Utrecht, The Netherlands Tel: +31 (0)88 7550406 Mob: +31 (0)6 24288813 Skype: j_de_ridder ------------------------------------------------------------------------------ De informatie opgenomen in dit bericht kan vertrouwelijk zijn en is uitsluitend bestemd voor de geadresseerde. Indien u dit bericht onterecht ontvangt, wordt u verzocht de inhoud niet te gebruiken en de afzender direct te informeren door het bericht te retourneren. Het Universitair Medisch Centrum Utrecht is een publiekrechtelijke rechtspersoon in de zin van de W.H.W. (Wet Hoger Onderwijs en Wetenschappelijk Onderzoek) en staat geregistreerd bij de Kamer van Koophandel voor Midden-Nederland onder nr. 30244197. Denk s.v.p aan het milieu voor u deze e-mail afdrukt. ------------------------------------------------------------------------------ This message may contain confidential information and is intended exclusively for the addressee. If you receive this message unintentionally, please do not use the contents but notify the sender immediately by return e-mail. University Medical Center Utrecht is a legal person by public law and is registered at the Chamber of Commerce for Midden-Nederland under no. 30244197. Please consider the environment before printing this e-mail. -------------- next part -------------- An HTML attachment was scrubbed... URL: From torgeir.r.hvidsten at nmbu.no Tue Aug 2 13:26:10 2016 From: torgeir.r.hvidsten at nmbu.no (Torgeir Rhoden Hvidsten) Date: Tue, 2 Aug 2016 13:26:10 +0200 Subject: [SocBiN] PhD position in bioinformatics, microbial ecology and meta-omics Message-ID: <878fcf28-0399-ed67-2ea6-8b03839ba714@nmbu.no> PhD position in bioinformatics, microbial ecology and meta-omics at NMBU in Norway: https://www.jobbnorge.no/ledige-stillinger/stilling/126218/phd-position-in-bioinformatics-microbial-ecology-and-meta-omics-refno-16-02681 Torgeir -- Torgeir R. Hvidsten Professor in Bioinformatics Department of Chemistry, Biotechnology and Food Science Norwegian University of Life Sciences Guest professor Umeå Plant Science Centre Department of Plant Physiology, Umeå University Phone: +4747957383 http://www.trhvidsten.org http://tinyurl.com/google-scholar-hvidsten From etienne.ruppe at genomic.ch Fri Aug 5 14:51:52 2016 From: etienne.ruppe at genomic.ch (Etienne =?UTF-8?B?UnVwcMOp?=) Date: Fri, 05 Aug 2016 14:51:52 +0200 Subject: [SocBiN] ICCMg 2nd annoucement Message-ID: <1470401512-769004ec7fbe9a483fb2bfa7bd2973fb@genomic.ch> [](http://www.clinicalmetagenomics.org/) Dear colleagues, We are pleased to inform you that the **final program** of the first International Conference on Clinical Metagenomics (ICCMg, Campus Biotech, Geneva, October 13-14 2016) is now available at the [conference website](http://www.clinicalmetagenomics.org/). We are proud to welcome **prestigious speakers** to cover the various aspects of clinical metagenomics and its applications: **NGS and bio-informatics** **Patrick Wincker**              *(Genoscope, Evry, France)*: Next-generation sequencing. **Nick Loman** *(University of Birmingham, UK)*: What's next in NGS? The Nanopore technology. **Aitana Lebrand** *(Swiss Institute of Bio-informatics, Geneva, Switzerland)*: Management of metagenomic data. **Clinical Metagenomics** **Georges Weinstock** *(Jackson Laboratory, Farmington, US)*: Probing the Medical Microbiome. **Marc Eloit** *(Institut Pasteur, Paris, France)*: Clinical metagenomics in immunocompromized patients. **Jerôme Bouquet** *(University of San Francisco, US)*: Clinical metagenomics for diagnosis of acute Infectious diseases. **Gilbert Greub** *(Institute of Microbiology, Lausanne, Switzerland)*: Clinical metagenomics for the discovery of new pathogens. **Derrick Crook** *(University of Oxford, UK)*: Inferring the antibiogram from genomes. **Etienne Ruppé** *(Geneva University Hospitals, Switzerland)*: Clinical metagenomics in bone and joint infections. **Frank Aarestrup** *(Danish Technical institute, Lyngby, Denmark)*: Clinical metagenomics in urinary-tract infection. **Judith Breuer** *(Faculty of Medical Sciences, London, UK)*: Detection of Mycobacterium tuberculosis directly from samples. **I****ntestinal Microbiota** **Dusko Ehrlich** *(Metagenopolis, Jouy-en-Josas, France)*: The intestinal microbiota and the link with diseases. **Eric Pamer** *(Memorial Sloan-Kettering Cancer Center, New York, US)*: Microbiota-mediated defense against intestinal infections. **Christopher Ford** *(Seres Therapeutics, Cambridge, US)*: Microbiome therapeutics. **Oncology** **Stylianos Antonarakis** *(Geneva University Hospitals, Switzerland)*: Metagenomics and tumor profiling **Peer Bork** *(EMBL, Heidelberg, Germany)*: Diagnostic of colon cancer using metagenomics. **Cynthia Sears** *(John Hopkins University, Baltimore, US)*: Using Biofilms and Metagenomics to Diagnose Colon Cancer. ICCMg will start on Thursday October 13 at 1:45pm and will end on Friday October 14 at 3:40pm. ICCMg will take place at **Campus Biotech**, which is nicely located close to the **Geneva Lake**and **easily accessible by public transportation** from the train station or airport. **Abstracts** are welcomed for **poster presentations**, please note the **August 31st as the deadline** for . The posters will be presented at the specific poster exhibition and open bar on Thursday evening, followed by the **conference dinner** (optional). We hope to welcome you in Geneva and are looking forward to receiving your . With best regards Etienne Ruppé, Enrico Zuffi and Jacques Schrenzel      ____________________________________ ICCMg 2016 Campus Biotech, Geneva October 13-14, 2016 Organised by the International Society for Clinical Metagenomics More information at [www.clinicalmetagenomics.org](http://www.clinicalmetagenomics.org/) -------------- next part -------------- An HTML attachment was scrubbed... URL: From andre.ribeiro at tut.fi Thu Aug 4 09:49:47 2016 From: andre.ribeiro at tut.fi (Andre Sanches Ribeiro) Date: Thu, 4 Aug 2016 07:49:47 +0000 Subject: [SocBiN] Open Post-Doc position at the Laboratory of Biosystem Dynamics (LBD), Tampere, Finland Message-ID: <9CF31F9C02BE594F946D94A125C75DB366223E@mb2010-3.intra.tut.fi> Hi Is it possible to mail the following announcement to the SocBin mailing list? Best regards Andre FYI, A Post-Doc position opened at the LBD for someone with PhD in biophysics, computational biology, physics and/or computer science/signal processing, to start in September 2016 or later. The position is for 2 or more years. The project, to take place at the LBD, Department of Signal Processing, Tampere University of Technology, involves the study of the dynamics of small genetic circuits in bacteria. A description of the position can be found attached or at: http://www.cs.tut.fi/~sanchesr/position.html A description of our group, etc. can be found at: http://www.cs.tut.fi/~sanchesr/index.html I would be grateful if you could forward this message to anyone you think it may be interested. Contacts: Andre S. Ribeiro Associate Professor, Laboratory of Biosystem Dynamics Department of Signal Processing Tampere University of Technology Phone: +358 408490736 Email: andre.ribeiro at tut.fi Webpage: http://www.cs.tut.fi/~sanchesr/ Address: Office TC336, P.O Box 553, 33101 Tampere, FINLAND -------------- next part -------------- An HTML attachment was scrubbed... URL: -------------- next part -------------- A non-text attachment was scrubbed... Name: PostDoc position at the LBD.doc Type: application/msword Size: 1913344 bytes Desc: PostDoc position at the LBD.doc URL: From Carsten.Daub at ki.se Wed Aug 10 11:23:05 2016 From: Carsten.Daub at ki.se (Carsten Daub) Date: Wed, 10 Aug 2016 09:23:05 +0000 Subject: [SocBiN] [Sep 29, 2016] RIKEN KI SciLifeLab Joint Symposium: Frontiers in Life Science Technologies - Decoding Health and Disease Message-ID: <36FF3ACB-8219-4EFB-B2AD-EAB3F6B94561@ki.se> Dear colleagues, I would like to advertise the upcoming 3rd RIKEN CLST - Karolinska Institutet - SciLifeLab Joint Symposium: Frontiers in Life Science Technologies. [DATE] September 29th, 2016 [TIME] ca. 9:30 - 17:15 [PLACE] Science for Life Laboratory Stockholm, Conference room Air/Fire Conference website http://www.clst.riken.jp/en/topics/event/160929seminar/ Registration is free under this link http://gerg-msg.gsc.riken.jp/ki-riken/application.jsp This year’s symposium entitled Frontiers in Life Science Technologies – Decoding Health and Disease, will focus on technologies and applications to approaching disease and health, and will consist of three sessions; Molecular imaging and disease, Single/stem cells and disease, RNA and disease. The symposium is open to the public, and active participation by scientists, young researchers, students and others interested in the field is very much welcome. [Speakers (Alphabetical order)] • Erik Arner RIKEN CLST • Piero Carninci RIKEN CLST • Goncalo Castelo-Branco Karolinska Institutet • Carsten Daub Karolinska Institutet / SciLifeLab / RIKEN • Lars Farde Karolinska Institutet • Tibor Harkany Karolinska Institutet • Kosuke Hashimoto RIKEN CLST • Juha Kere Karolinska Institutet • Rolf Lewensohn Karolinska Institutet • Sten Linnarsson Karolinska Institutet • Johan Lundberg Karolinska Institutet • Joakim Lundeberg KTH Royal Institute of Technology / SciLifeLab • Satoshi Nozaki RIKEN CLST • Jay W. Shin RIKEN CLST • Chikako Suzuki Karolinska Institutet • Kayo Takahashi RIKEN CLST • Yasuhisa Tamura RIKEN CLST • Andrea Varrone Karolinska Institutet • Yasuyoshi Watanabe RIKEN CLST Best, Carsten -------------- next part -------------- An HTML attachment was scrubbed... URL: From jeroen.raes at vib-kuleuven.be Wed Aug 10 14:35:46 2016 From: jeroen.raes at vib-kuleuven.be (Jeroen Raes) Date: Wed, 10 Aug 2016 12:35:46 +0000 Subject: [SocBiN] metagenomics/microbiome position Leuven, Belgium Message-ID: <92cdf29a43d14adaa50d7801a395d198@ICTS-S-EXMBX19.luna.kuleuven.be> Dear all, I have an opening for a postdoc interested in the wonderful world of the microbiome - see attached. Can you please forward this to people that might be interested? Thanks! Kind regards, Jeroen -- Prof. Jeroen Raes, PhD Bioinformatics and (eco-)systems biology lab Department of Microbiology and Immunology, Rega institute, KU Leuven VIB Center for the Biology of Disease KU Leuven - Campus Gasthuisberg O&N I Herestraat 49 - box 1028 3000 Leuven jeroen.raes at med.kuleuven.be Phone: +32 (0)16 330678 http://www.raeslab.org -------------- next part -------------- An HTML attachment was scrubbed... URL: -------------- next part -------------- A non-text attachment was scrubbed... Name: position_raes_lab_KULeuven.pdf Type: application/pdf Size: 190781 bytes Desc: position_raes_lab_KULeuven.pdf URL: From shamit.soneji at med.lu.se Mon Aug 15 09:12:04 2016 From: shamit.soneji at med.lu.se (Shamit Soneji) Date: Mon, 15 Aug 2016 09:12:04 +0200 Subject: [SocBiN] Post-doctoral fellowship in bioinformatics available at Lund University, Sweden Message-ID: <57B16B44.9030205@med.lu.se> *We are looking for a dynamic bioinformatician with an interest in hematopoiesis to join our team at Lund Stem Cell Center, Sweden* *Job description:* We are looking for a candidate who will join our efforts to decipher the molecular events that lead to transformation as well as therapy resistance of stem cells in blood malignancies. The successful candidate will join a dynamic and multidisciplinary environment at the interface between the cancer and stem cell fields, molecular genetics and bioinformatics and assist with the design, analysis, and interpretation of generated data. While closely collaborating with colleagues in the lab, the candidate is at the same time expected to drive his/her own research project. *Our lab: * Lund University is ranked as one of the top 100 universities in the world. The ‘Stem Cells and Leukemia group’, located at the Division of Molecular Hematology, Lund University, focuses on the blood forming stem cells in health and disease. (http://www.med.lu.se/labmedlund/molecular_hematology/investigator_profiles/goeran_karlsson). Using primary patient material and high-throughput methods, our aim is to decipher the master regulatory switches responsible for cell identity, function, and state. Together, our work allows for deeper knowledge of events leading to transformation, therapy resistance, and rational targeting of leukemia. * Working and living environment* Sweden is consistently ranked as one of the best places to work and live in the world. In the southernmost part of the country, surrounded by beaches and beautiful countryside, Lund is situated just 45 minutes from Copenhagen. Lund is a vibrant university town with a combination of ancient and modern architecture. Home to a millennium old cathedral, the city prides itself for being a seat of advanced learning and technology (http://www.lund.se/en/). Lund University has contributed a lot to path-breaking innovations such as Bluetooth^TM , artificial kidney and ultrasound to name a few. Our lab closely mirrors the creative ethos embodied by the city. *Essential qualifications and skills* -Applicants should hold a PhD in bioinformatics or equivalent. -Strong publication record (minimum two first-author publications in peer reviewed journals). -Advanced knowledge of Python/Perl, R/Bioconductor, C/C++, Linux/UNIX environment, Javascript, Cloud computing, Knowledge of machine learning and support vector machines, as well as experience in creating databases or web-servers is extra meriting. -Expertise in data science: data mining, statistics, multi-omics data integration using The Cancer Genome Atlas (TCGA) project, ENCODE, BLUEPRINT, FANTOM etc. -Demonstrated experience in analysis of genome scale biological datasets is required such as (but not limited to), RNA-seq, ChIP-seq, ATAC-seq, gene expression meta-analysis, analysis of regulatory elements e.g. enhancer subclasses, enhancer RNAs. -Excellent mentoring skills and a keen interest in developing further teaching experience. -The successful candidate should have very good interpersonal skills and a strong passion for collaborations across institutional borders. -Excellent communication skills in written and spoken English. * What we offer:* Start date: As soon as possible Duration: Two years with a possibility of extension Environment: -High performance computing facilities at Lund University -Advanced scientific infrastructure (http://www.med.lu.se/labmedlund/molecular_hematology/technology_platforms); -Opportunity to interact with Bioinformatics core group within the division -Funding: The position is funded for two years, but opportunity and support to apply for extramural funding is provided. *Application * Please email your application including a CV (including education, employment and track record), a brief description of your research experience and interest, and contact information of three references to: *Assistant Professor Göran Karlsson* Lund University, Lund Sweden Contact: goran.karlsson at med.lu.se : -------------- next part -------------- An HTML attachment was scrubbed... URL: From erik.kristiansson at chalmers.se Thu Aug 18 18:10:06 2016 From: erik.kristiansson at chalmers.se (Erik Kristiansson) Date: Thu, 18 Aug 2016 18:10:06 +0200 Subject: [SocBiN] Post-doc position in bioinformatics available at Chalmers University of Technology, Gothenburg, Sweden In-Reply-To: <57288DB0.2000607@chalmers.se> References: <52264493.30404@chalmers.se> <56C9AED2.8050402@chalmers.se> <57288DB0.2000607@chalmers.se> Message-ID: <57B5DDDE.8040100@chalmers.se> Everyone, We have a two-year post-doc position in bioinformatics with focus on metagenomics available at Chalmers University of Technology, Göteborg, Sweden. Full details are available at http://www.chalmers.se/en/about-chalmers/vacancies/Pages/default.aspx?rmpage=job&rmjob=4224 Best regards, Erik -- -------------------------------------------------------------------------------- Erik Kristiansson, Associate Professor Applied Mathematics and Statistics Department of Mathematical Sciences Chalmers University of Technology, Sweden Email: erik.kristiansson at chalmers.se, Phone: +46 (0)31 772 3521 -------------------------------------------------------------------------------- From olofem at kth.se Fri Aug 19 09:25:44 2016 From: olofem at kth.se (Olof Emanuelsson) Date: Fri, 19 Aug 2016 09:25:44 +0200 Subject: [SocBiN] Postdoctoral position in bioinformatics available at SciLifeLab Stockholm In-Reply-To: <62755081-8f6f-2ecc-79bf-9959cf46227d@kth.se> References: <62755081-8f6f-2ecc-79bf-9959cf46227d@kth.se> Message-ID: <965686f4-280c-619d-0f88-2285aa1838b4@kth.se> Dear all, just a post-vacation reminder about the available postdoctoral position in my lab @ SciLifeLab (Stockholm). More info: https://careers.iscb.org/jobs/view/5117 The focus is on method development for analysis of NGS transcriptomics data, e.g. allele-specific expression. Review of applications will start 30 August. Olof -------- Vidarebefordrat meddelande -------- Ämne: Postdoctoral position in bioinformatics available at SciLifeLab Stockholm Datum: Tue, 21 Jun 2016 14:14:08 +0200 Från: Olof Emanuelsson Till: socbin-at-sbc.su.se at lists.su.se Dear all, One postdoc position is available in my group at SciLifeLab Stockholm (salaried position). Please see full announcement text below or in the attached pdf. Also, please feel free to forward this announcement to candidates that might be interested. Any questions should be directed to Olof Emanuelsson, olofem at kth.se. Olof Emanuelsson -- Associate Professor School of Biotechnology, KTH SciLifeLab Stockholm, Sweden Email: olofem at kth.se Phone: +46-8-5248-1458 Post-Doctoral Research Position in Bioinformatics available in the Emanuelsson lab at SciLifeLab, Stockholm (Sweden) A post-doctoral position is available at Science for Life Laboratory (SciLifeLab) in Stockholm. This is a unique opportunity to join SciLifeLab, a Swedish national resource center for large-scale biological, biotechnological, and medical research. SciLifeLab is a joint enterprise formed by the Karolinska Institutet, Stockholm University, Uppsala University, and KTH Royal Institute of Technology. We are looking for an enthusiastic and talented postdoctoral researcher to join the lab of Associate Professor Olof Emanuelsson, affiliated with the School of Biotechnology at the Royal Institute of Technology (KTH) in Stockholm. Work description: The work will consist of bioinformatics method development for massively parallel sequencing data, with particular focus on RNA-seq, including allele-specific expression (ASE) and transcriptome assembly. The proposed project is a continuation of our recently published work (Edsgärd et al, Sci. Rep. 6:21134, 2016), with a number of possible subprojects, e.g., phasing of RNA-seq reads including the use of longer reads, improvement of ASE detection (with and without haploisoform information), and identification of potential regulatory variants associated with ASE of nearby genes. Requirements: The successful candidate will have a PhD (or equivalent) in computer science, mathematics, physics, bioinformatics, molecular biology or related field with a strong quantitative background. Thorough experience with Unix (or a variant thereof), R, scripting software (e.g., Perl or Python) or other programming languages such as C or Java is required. Experience with handling large data sets, and from bioinformatics method development, is highly desired. The ability to work both independently and collaboratively is highly valued. Excellent command of written and spoken English is a requirement. Type of position: This is a salaried post-doctoral position for one year with a possible second-year extension. The postdoctoral researcher will be employed by KTH Royal Institute of Technology and the workplace is SciLifeLab Stockholm. Application instructions: To apply, please send an email to Olof Emanuelsson, olofem at kth.se. Please use the exact subject line ”Postdoctoral application 2016” and include the following documents (preferably combined into one single pdf): (i) a letter stating your research experience and interests (ii) a curriculum vitae including list of publications (iii) name and contact information for yourself and two or three references Review of applications will start on 30 August 2016 and continue until the position is filled. The starting date is negotiable, however, the successful candidate will be encouraged to start as soon as possible. We welcome all applicants regardless of ethnicity or gender. For more information, see https://www.scilifelab.se/researchers/olof-emanuelsson/ or send an email with the exact subject line “Postdoctoral application 2016 inquiry”. -------------- next part -------------- A non-text attachment was scrubbed... Name: Postdoc_Bioinfo_Stockholm.OE.2016.pdf Type: application/pdf Size: 49134 bytes Desc: not available URL: From bjarnivh at ru.is Sat Aug 20 14:07:36 2016 From: bjarnivh at ru.is (Bjarni Halldorsson) Date: Sat, 20 Aug 2016 12:07:36 +0000 Subject: [SocBiN] DNA sequencing algorithms developer at deCODE genetics Message-ID: DNA sequencing algorithms developer Headquartered in Reykjavik, Iceland, deCODE is a global leader in analyzing and understanding the human genome. Using our unique expertise and population resources, deCODE has discovered key genetic risk factors for dozens of common diseases ranging from cardiovascular disease to cancer. The algorithms group is responsible for developing methods for the analysis of the large-scale sequencing data from several platforms generated at deCODE. Responsibilities: Develop algorithms and software for detecting structural variations and genomic abnormalities from DNA sequencing data. Contribute to the analysis and interpretation of sequencing data in a multidisciplinary team. Initiate and contribute to team efforts leading to scientific publications. Requirements: Ph.D. in Computer Science, Bioinformatics or Mathematics. Knowledge of algorithms for sequence analysis. Proficiency in C++ and Python Publication track record. Good spoken and written communication skills. Experience in working with sequencing data is a plus. Applicants should send a CV, cover letter and two letters of recommendation to careers at decode.is -- Bjarni V. Halldorsson Research Scientist, deCODE Genetics Associate Professor, Biomedical Engineering, Reykjavik University x-354-664-1808 bioinformatics.ru.is, bjarnivh at ru.is -------------- next part -------------- An HTML attachment was scrubbed... URL: -------------- next part -------------- A non-text attachment was scrubbed... Name: decodeemploymentA4print.pdf Type: application/pdf Size: 5313446 bytes Desc: not available URL: From jussi.paananen at uef.fi Wed Aug 31 11:09:31 2016 From: jussi.paananen at uef.fi (Jussi Paananen) Date: Wed, 31 Aug 2016 09:09:31 +0000 Subject: [SocBiN] PhD Student / Data-mining for adverse drug events Message-ID: <74b7ea7b30b644a6a691f7c2c395d229@UEF-EXC13-02.uefad.uef.fi> Hi, We are looking for a PhD student for a project related to data-mining of for adverse drug events. Suitable for a person with background e.g. in bioinformatics/computer science/statistics/machine learning/data-analytics. Position is located at the University of Eastern Finland (UEF), Kuopio, Finland (www.uef.fi). Apply through UEF electronic application system, more information in the attached PDF file! Best regards, Jussi --- Jussi Paananen, Ph.D. Assistant Professor of Neurobioinformatics Manager of Bioinformatics Center Institute of Biomedicine / School of Medicine University of Eastern Finland -------------- next part -------------- An HTML attachment was scrubbed... URL: -------------- next part -------------- A non-text attachment was scrubbed... Name: UEF_PhD_datamine.pdf Type: application/pdf Size: 13183 bytes Desc: UEF_PhD_datamine.pdf URL: