From daniele.raimondi at igmm.cnrs.fr Fri Dec 5 19:51:45 2025 From: daniele.raimondi at igmm.cnrs.fr (Daniele Raimondi ) Date: Sat, 6 Dec 2025 07:51:45 +1300 Subject: [SocBiN] =?utf-8?q?Postdoctoral_Position_=E2=80=93_Deep_Learning_?= =?utf-8?q?models_to_predict_phenotypes_from_genomics_data?= Message-ID: An HTML attachment was scrubbed... URL: From arne.elofsson at gmail.com Mon Dec 8 09:32:48 2025 From: arne.elofsson at gmail.com (Arne Elofsson) Date: Mon, 8 Dec 2025 09:32:48 +0100 Subject: [SocBiN] =?utf-8?q?Fwd=3A_Join_Us_at_the_Data_Driven_Systems_Biol?= =?utf-8?q?ogy_Conference_=E2=80=93_Register_Now!?= In-Reply-To: <0F1B1AD6-7976-4E03-A518-2CEC378824A0@SciLifeLab.se> References: <0F1B1AD6-7976-4E03-A518-2CEC378824A0@SciLifeLab.se> Message-ID: *Dear Community,* We are excited to invite you to the *Data-Driven Life Science Cell and Molecular Biology Conference: Data Driven Systems Biology – Harnessing Big Data and Systems Approaches to Decode Complex Biology*, taking place *March 24–25 at Life City , Stockholm*. Event website here The conference brings together leading researchers who are leveraging computational, statistical, and systems-level approaches to integrate and interpret complex biological data. We will explore how multi-omics, single-cell technologies, and spatial profiling, combined with advanced computational modeling and machine learning, are reshaping our understanding of dynamic biological systems. *Highlights:* - Talks by international and national experts - Poster session and networking opportunities *Confirmed speakers include:* Alfonso Valencia (Barcelona Supercomputing Center), Lucy Colwell (University of Cambridge), Carsten Hopf (Heidelberg University), and many more. *Register here * to secure your spot! Limited to 250p. The deadline to register and submit a poster is *March 10.* We look forward to seeing you in Stockholm for two inspiring days of science and collaboration. *Organized by:* Arne Elofsson & Eduardo Villablanca, DDLS Expert Group in Cell and Molecular Biology *Contact:* events at scilifelab.se *The list(s) has been created to share news and updates about SciLifeLab activities. Everyone within the SciLifeLab community is welcome to sign up and send emails that concern SciLifeLab operations or, in other ways, are highly relevant to community members. * *Campus Solna - Sign up or Unsubscribe on “My page”: https://staff.scilifelab.se * *Uppsala - Unsubscribe: https://lists.uu.se/sympa/info/scilifelab * *The list homepage: https://lists.uu.se/sympa/info/scilifelab * *General information about mailing lists: https://lists.uu.se/sympa/help/introduction * -- This list has been created to share general news and updates about SciLifeLab Campus Solna activities. Everyone within the SciLifeLab Campus Solna community may sign up and use this group list to communicate information that concerns SciLifeLab Campus Solna operations or in other ways are of relevance to members of the community. Sign up or Unsubscribe on “My page”: https://staff.scilifelab.se -------------- next part -------------- An HTML attachment was scrubbed... URL: -------------- next part -------------- A non-text attachment was scrubbed... Name: DDLS-CMB-March-2026_EE.jpg Type: image/jpeg Size: 536952 bytes Desc: not available URL: From per.stenberg at umu.se Tue Dec 9 10:02:54 2025 From: per.stenberg at umu.se (Per Stenberg) Date: Tue, 9 Dec 2025 09:02:54 +0000 Subject: [SocBiN] PhD in Airborne eDNA for Tracking Biodiversity Change Message-ID: PhD-student position at Department of Wildlife, Fish, and Environmental Studies, SLU, Umeå, Sweden https://www.slu.se/en/about-slu/work-at-slu/jobs-and-vacancies/doktorand4/ Please, spread in your network. Cheers, \Per ------------------------------------------------------------ Per Stenberg, PhD, Principal investigator Department of Ecology and Environmental Science (EMG) Umeå University SE-901 87 Umeå Sweden E-mailing Umeå University means that we will process your personal data. For more information, please read: umu.se/en/gdpr -------------- next part -------------- An HTML attachment was scrubbed... URL: From nouairiaghada at gmail.com Wed Dec 10 10:21:54 2025 From: nouairiaghada at gmail.com (Ghada Nouairia) Date: Wed, 10 Dec 2025 10:21:54 +0100 Subject: [SocBiN] Doctoral (PhD) student position in AI-driven analysis in PSC at Karolinska Institutet Message-ID: Hi, Please help us find the right candidate by sharing this advertisement. Any help is appreciated! Our group is placed within the Unit of Gastroenterology and Nutrition at the Department of Medicine, Huddinge (MedH), Karolinska Institutet and focuses on precision medicine approaches for liver and biliary diseases, particularly primary sclerosing cholangitis (PSC) and biliary tract cancers (BTC). We combine clinical cohorts, imaging, omics, and artificial intelligence to improve risk prediction, diagnosis, and treatment outcomes in these diseases. The PhD student will join an interdisciplinary environment of clinicians, bioinformaticians, and immunologists, working at the interface of hepatology and data science. https://kidoktorand.varbi.com/what:job/jobID:872778/ Thank you! Ghada NOUAÏRIA, PhD Department of Medicine Karolinska Institutet Sweden -------------- next part -------------- An HTML attachment was scrubbed... URL: From francesco.tabaro at gmail.com Wed Dec 10 11:18:33 2025 From: francesco.tabaro at gmail.com (Francesco Tabaro) Date: Wed, 10 Dec 2025 10:18:33 +0000 Subject: [SocBiN] Internship opportunity at EMBL Rome Message-ID: The Boulard group is looking for an intern to work on a sequence analysis project related to the characterization of regulatory sequences in the mouse genome. We are looking for someone with R and, ideally, Bioconductor experience who is interested in learning about gene expression regulation and genomics. We offer hands-on experience in computational genomics, supervision, further training in data analysis technologies, and the opportunity to contribute to cutting-edge research. The position is funded for 6-12 months and is based at EMBL Rome. To apply, please contact Dr. Francesco Tabaro (francesco.tabaro at embl.it) and Dr. Mathieu Boulard (matthieu.boulard at embl.it) with your CV and motivation letter. Thank you! Francesco From francesco.tabaro at gmail.com Wed Dec 10 11:18:33 2025 From: francesco.tabaro at gmail.com (Francesco Tabaro) Date: Wed, 10 Dec 2025 10:18:33 +0000 Subject: [SocBiN] Internship opportunity at EMBL Rome Message-ID: The Boulard group is looking for an intern to work on a sequence analysis project related to the characterization of regulatory sequences in the mouse genome. We are looking for someone with R and, ideally, Bioconductor experience who is interested in learning about gene expression regulation and genomics. We offer hands-on experience in computational genomics, supervision, further training in data analysis technologies, and the opportunity to contribute to cutting-edge research. The position is funded for 6-12 months and is based at EMBL Rome. To apply, please contact Dr. Francesco Tabaro (francesco.tabaro at embl.it) and Dr. Mathieu Boulard (matthieu.boulard at embl.it) with your CV and motivation letter. Thank you! Francesco From juho.rousu at aalto.fi Wed Dec 10 16:56:51 2025 From: juho.rousu at aalto.fi (Rousu Juho) Date: Wed, 10 Dec 2025 15:56:51 +0000 Subject: [SocBiN] Post-doctoral position in Molecular Machine Learning Message-ID: Are you interested in developing new machine learning methods for molecular data? There is an opening for a post-doctoral researcher in my research group at Aalto University Department of Computer Science. Apply by January 12! https://www.aalto.fi/en/open-positions/post-doctoral-position-in-molecular-machine-learning Best regards, Juho Rousu -------------- next part -------------- An HTML attachment was scrubbed... URL: From arne.elofsson at gmail.com Fri Dec 12 17:11:29 2025 From: arne.elofsson at gmail.com (Arne Elofsson) Date: Fri, 12 Dec 2025 17:11:29 +0100 Subject: [SocBiN] Fwd: SciLifeLab PULSE - information to prospective hosting PIs call2 (links updated) In-Reply-To: <5006DC43-5133-4172-9E1E-414C6B9619A5@scilifelab.se> References: <8570E8E7-AACD-42C6-8D9B-81BCEFF9D626@scilifelab.se> <5006DC43-5133-4172-9E1E-414C6B9619A5@scilifelab.se> Message-ID: Please spread this information to interested potential postdocs Yours Arne ----------------------------------------- Arne Elofsson Science for Life Laboratory Tel:+46-(0)70 695 1045 Stockholm University http://bioinfo.se/ Box 1031, Email: arne at bioinfo.se 17121 Solna, Sweden Bluesky: @bioinfo.se Twitter/X: @arneelof Mastodon: @arneelof at fediscience.org Zoom: https://stockholmuniversity.zoom.us/my/arneelof/ Scholar: http://scholar.google.se/citations?user=s3OCM3AAAAAJ ORCID: 0000-0002-7115-9751 ---------- Forwarded message --------- From: Pulse SciLifeLab Date: Fri, Dec 12, 2025 at 1:06 PM Subject: Re: SciLifeLab PULSE - information to prospective hosting PIs call2 (links updated) To: Hi, Sorry about the extra message but it turns out some of the links in the previous message were broken: Link to matchmaking portfolios: https://www.scilifelab.se/research/pulse/application/#h-matchmaking-portfolios General information for PULSE PIs: https://www.scilifelab.se/research/pulse/pulse-guidelines-support/#h-for-principal-investigators-postdoc-hosts All the best Disa Disa Hammarlöf, Program manager SciLifeLab national postdoc program PULSE Science for Life Laboratory Box 1031, 171 21 Solna | Tomtebodavägen 23 www.scilifelab.se On 11 Dec 2025, at 15:32, Pulse SciLifeLab wrote: Dear SciLifeLab Group Leader, Thank you for your interest in the SciLifeLab PULSE program as prospective postdoc host. All PI profiles are now updated in the PI matchmaking portfolio for call 2, opening on Monday, Dec 15. General information for PULSE PIs can be found here . *Please find in attachment important information from the Drug Discovery & Development platform, directed towards SGLs that will host entrepreneurial track postdocs. * We would like to already now inform you of key dates in the spring 2026 evaluation phase and ask that you note them. A separate invitation to join as an independent SciLifeLab expert will be sent to PIs not serving as main hosts. Invitations to specific evaluation panels will be distributed >1 week before the interviews (full evaluation timeline ). - Interview phase 1 (2 external, international evaluators and *1 independent SciLifeLab expert*): May 4-8 - Interview phase 2 (*1 independent SciLifeLab expert, hosting PI and 1 departmental scientific representative*): May 27-29 Finally, to maximise outreach to excellent candidates, we kindly ask for your support in sharing information about SciLifeLab PULSE in your networks, at international conferences etc (ppt slide and flyer attached), as well as resharing SciLifeLab PULSE LinkedIN posts, news items etc. Kind regards, Disa Disa Hammarlöf, Program manager SciLifeLab national postdoc program PULSE Science for Life Laboratory Box 1031, 171 21 Solna | Tomtebodavägen 23 www.scilifelab.se -------------- next part -------------- An HTML attachment was scrubbed... URL: -------------- next part -------------- A non-text attachment was scrubbed... Name: scilifelab_logo_email.png Type: image/png Size: 5718 bytes Desc: not available URL: -------------- next part -------------- A non-text attachment was scrubbed... Name: PULSE entrepreneurial track_information for SciLifeLab group leaders from DDD.docx Type: application/vnd.openxmlformats-officedocument.wordprocessingml.document Size: 57067 bytes Desc: not available URL: -------------- next part -------------- A non-text attachment was scrubbed... Name: PULSE-slide_to-share.pptx Type: application/vnd.openxmlformats-officedocument.presentationml.presentation Size: 310480 bytes Desc: not available URL: -------------- next part -------------- A non-text attachment was scrubbed... Name: Flyer-PULSE_251126.pdf Type: application/pdf Size: 893226 bytes Desc: not available URL: From arne.elofsson at gmail.com Mon Dec 15 11:28:49 2025 From: arne.elofsson at gmail.com (Arne Elofsson) Date: Mon, 15 Dec 2025 11:28:49 +0100 Subject: [SocBiN] Fwd: [general-solna] Second call for SciLifeLab PULSE postdocs open! In-Reply-To: References: Message-ID: Dear all, We are excited to announce the launch of the second call for SciLifeLab PULSE today, with the aim of recruiting 27 postdocs to the program. The application deadline is March 16, 2026. We would greatly appreciate your help in sharing this exciting opportunity with early-career researchers in your international networks: SciLifeLab PULSE aims to equip future leaders in the molecular life sciences for successful careers in academia or industry. Key elements of the program include: - Individually designed research project, with a SciLifeLab Group Leader as main host, and a mandatory 3–6 month secondment with a partner in the PULSE consortium (the program is also open to welcoming new partners) - An ambitious, interdisciplinary, intersectoral, and international training program - Eligibility criteria: candidates must have been awarded their PhD within the last three years and must not have resided in Sweden for more than 12 months during the past three years. - Project duration: 3 years with full employment; start date: 1 October 2026. - Program funded through EU MSCA-COFUND More information about SciLifeLab PULSE and link to application portal at: https://www.scilifelab.se/research/pulse/ Material to (re)share: - LinkedIn: https://www.linkedin.com/feed/update/urn:li:activity:7406271832393355264- Bluesky: https://bsky.app/profile/scilifelab.se/post/3m7zeypivh22f- Link to SciLifeLab Careers page: https://www.scilifelab.se/career/scilifelab-pulse-postdoc-program-for-future-leaders-in-life-science-academia-and-industry-2/ - SciLifeLab PULSE flyer and ppt slide attached. *For the SciLifeLab PULSE Management Group* -- You received this message because you are subscribed to the Google Groups "General Solna" group. To unsubscribe from this group and stop receiving emails from it, send an email to general-solna+unsubscribe at scilifelab.se. To view this discussion visit https://groups.google.com/a/scilifelab.se/d/msgid/general-solna/B18ADE79-5F77-49E7-8240-B0D123F8F5F6%40scilifelab.se . -- You received this message because you are subscribed to the Google Groups "General Solna" group. To unsubscribe from this group and stop receiving emails from it, send an email to general-solna+unsubscribe at scilifelab.se. To view this discussion visit https://groups.google.com/a/scilifelab.se/d/msgid/general-solna/B18ADE79-5F77-49E7-8240-B0D123F8F5F6%40scilifelab.se . Disa Hammarlöf, Program manager SciLifeLab national postdoc program PULSE Science for Life Laboratory Box 1031, 171 21 Solna | Tomtebodavägen 23 www.scilifelab.se -- You received this message because you are subscribed to the Google Groups "General Solna" group. To unsubscribe from this group and stop receiving emails from it, send an email to general-solna+unsubscribe at scilifelab.se. To view this discussion visit https://groups.google.com/a/scilifelab.se/d/msgid/general-solna/B18ADE79-5F77-49E7-8240-B0D123F8F5F6%40scilifelab.se . -- You received this message because you are subscribed to the Google Groups "General Solna" group. To unsubscribe from this group and stop receiving emails from it, send an email to general-solna+unsubscribe at scilifelab.se. To view this discussion visit https://groups.google.com/a/scilifelab.se/d/msgid/general-solna/B18ADE79-5F77-49E7-8240-B0D123F8F5F6%40scilifelab.se . -------------- next part -------------- An HTML attachment was scrubbed... URL: -------------- next part -------------- A non-text attachment was scrubbed... Name: Flyer-PULSE.pdf Type: application/pdf Size: 894843 bytes Desc: not available URL: -------------- next part -------------- A non-text attachment was scrubbed... Name: PULSE-slide_to-share.pptx Type: application/vnd.openxmlformats-officedocument.presentationml.presentation Size: 310480 bytes Desc: not available URL: -------------- next part -------------- A non-text attachment was scrubbed... Name: scilifelab_logo_email.png Type: image/png Size: 5718 bytes Desc: not available URL: From arne.elofsson at gmail.com Tue Dec 16 16:07:24 2025 From: arne.elofsson at gmail.com (Arne Elofsson) Date: Tue, 16 Dec 2025 16:07:24 +0100 Subject: [SocBiN] Fwd: Open positions at the Aloy lab (IRB Barcelona) In-Reply-To: <41f3fabe-09bb-485d-9c70-3bd22d0d4298@irbbarcelona.org> References: <41f3fabe-09bb-485d-9c70-3bd22d0d4298@irbbarcelona.org> Message-ID: From: Patrick Aloy Calaf Date: Tue, 16 Dec 2025, 15:56 Subject: Open positions at the Aloy lab (IRB Barcelona) To: Dear Friends and Colleagues, many of the researchers in my lab are finishing their projects and moving on to new positions. We are thus recruiting at all career levels, and I should be grateful if you could distribute this message among your teams and forward it to people that might be interested. Please, find below three offers to work in my lab as Research Associate (i.e. senior researchers with an open contract), Postdoctoral Fellow and IT Developer. Research Associate: https://recruitment.irbbarcelona.org/jobs/6928145-research-associate-on-genai-applied-to-drug-discovery-ref-pd-25-23 Postdoctoral Fellow: https://recruitment.irbbarcelona.org/jobs/6927502-postdoctoral-fellow-on-multi-omics-analyses-and-biological-data-sciences-ref-pd-25-22 IT Developer: https://recruitment.irbbarcelona.org/jobs/6927780-computational-biology-developer-ref-lab-25-23 Thanks for your help, and have a great Xmas ! Best, PTCK. -- Patrick Aloy, ICREA Research Professor Structural Bioinformatics & Network Biology Institute for Research in Biomedicine (IRB Barcelona) c/ Baldiri i Reixac 10-12, 08028 Barcelona, Spain Email: patrick.aloy at irbbarcelona.org http://sbnb.irbbarcelona.org Tel : +34 93 4039690 -------------- next part -------------- An HTML attachment was scrubbed... URL: From bartoszekkj at gmail.com Tue Dec 23 18:39:49 2025 From: bartoszekkj at gmail.com (Krzysztof Bartoszek) Date: Tue, 23 Dec 2025 18:39:49 +0100 Subject: [SocBiN] Merry Christmas and open PhD position in Statistics Message-ID: Dear everyone, At the Division of Statistics and Machine Learning, Department of Computer and Information Science Linköping University we have put out an announcement for a PhD student in Statistics position related to phylogenetic comparative methods : https://liu.se/en/work-at-liu/vacancies/28230 I would be grateful for spreading it out to anyone who could be interested. And of course I encourage everyone interested to apply! Merry Christmas and a Happy New Year! Krzysztof Bartoszek, PhD, Fil. Lic., MPhil, MEng Docent, Bitr. Prof. in Statistics Department of Computer and Information Science (IDA) Linköping University Phone: +46 (0)13-28 18 85 krzysztof.bartoszek at liu.se