[Funcoup] [SNIC support #70987] Re: SBC AFS file server crash at PDC

[Thomas Schmitt]

I do have the training results, identifier mappings and the data I have upload.
That is: PEX, Blast bit-scores, InParanoid mappings, Complex GS
Its about 2G in total.
Although I'm not 100% positive that Andrey hasn't changed the files after my upload.

/Thomas


On May 31, 2012, at 11:38 AM, Erik Sonnhammer wrote:

> Hi, it seems we won't get back the FunCoup scratch disk.
> 
> How much of that information is still around?  I think we should have at 
> least all of the raw datasets somewhere, and ideally all the training 
> results.
> 
> Should we ask for a backed up project disk for FunCoup, or is it enough 
> to keep it on Andrey's volume?
> 
> /Erik
> 
> On 05/30/2012 10:52 AM, Dejan Vitlacil via SNIC support wrote:
>> Hi Erik,
>> 
>> unfortunately we didn't manage to recover data from the broken RAID.
>> 
>> Cheers,
>> Dejan
>> PDC-Staff
>> 
>>> [Erik.Sonnhammer at sbc.su.se - Mon May 28 08:01:14 2012]:
>>> 
>>> Hi, I'm wondering if you have managed to salvage "prj.sbc.erison.8"
>>> from
>>> the broken RAID.
>>> 
>>> Bests
>>> Erik
>>> 
>>> On 2012-03-20 16:32, Dejan Vitlacil via SNIC support wrote:
>>>> Hi Erik.
>>>> 
>>>> Sorry to inform you that your volume "prj.sbc.erison.8" was created
>>> without backup, on your request.
>>>> So it will not be among volumes that we are restoring from our tape
>>> backup.
>>>> 
>>>> On the other hand, we are working and trying to save as much as we
>>> can from the broken RAID, but
>>>> right now I can't give you more information as it is ongoing
>>> process.
>>>> 
>>>> We will contact you as soon as we know more.
>>>> 
>>>> Cheers,
>>>> Dejan
>>>> PDC-Staff
>>>> 
>>>> 
>>>>> [Erik.Sonnhammer at sbc.su.se - Tue Mar 20 15:15:31 2012]:
>>>>> 
>>>>> Ledsen men jag måste åter önska att prj.sbc.erison.8 kommer
>>> tillbaka
>>>>> så
>>>>> snart som möjligt.  Den verkar ha försvunnit igen!
>>>>> 
>>>>> MVH
>>>>> Erik
>>>>> 
>>>>> On 3/20/2012 2:49 PM, Erik Sonnhammer wrote:
>>>>>> Hej, ni kan bortse från denna ticket - den var redan tillbaka.
>>>>>> 
>>>>>> Ber om ursäkt
>>>>>> Erik
>>>>>> 
>>>>>> On 03/20/2012 02:18 PM, PDC support via SNIC support wrote:
>>>>>>> Greetings,
>>>>>>> 
>>>>>>> This is an automatic confirmation that we have received your
>>>>> trouble
>>>>>>> ticket
>>>>>>> regarding:
>>>>>>>      "Re: SBC AFS file server crash at PDC",
>>>>>>> a summary of which appears below.
>>>>>>> 
>>>>>>> There is no need to reply to this message right now.  Your ticket
>>>>> has
>>>>>>> been
>>>>>>> assigned an ID of [SNIC support #70987].
>>>>>>> 
>>>>>>> Please include the string (including the brackets):
>>>>>>> 
>>>>>>>            [SNIC support #70987]
>>>>>>> 
>>>>>>> in the subject line of all future correspondence about this
>>> issue.
>>>>> To
>>>>>>> do so,
>>>>>>> you may reply to this message.
>>>>>>> 
>>>>>>>                           Thank you,
>>>>>>>                           support at pdc.kth.se
>>>>> 
>>> -------------------------------------------------------------------------
>>>>>>> Hej, om man får be om en tjänst så vore det att öka prioriteten
>>> för
>>>>>>> /afs/pdc.kth.se/misc/pdc/volumes/sbc/prj.sbc.erison.8.  Den ser
>>>>> kanske
>>>>>>> ut som en projektvolym men är i själva verket min hemkatalog.
>>>>>>> 
>>>>>>> MVH
>>>>>>> Erik Sonnhammer
>>>>>>> 
>>>>>>> On 03/19/2012 06:58 PM, Erik Sjölund wrote:
>>>>>>>> Regarding the AFS file server crash at PDC. You could follow the
>>>>>>>> news here:
>>>>>>>> 
>>>>>>>> http://www.pdc.kth.se/cgi-bin/flash/flash.py
>>>>>>>> 
>>>>>>>> Here is some more information from PDC:
>>>>>>>> (short translation: Home volumes have been restored but project
>>>>>>>> volumes will take a while)
>>>>>>>> 
>>>>>>>> "ALLA volymer som fanns på server shad.pdc.kth.se är borta pga
>>> att
>>>>>>>> _tre_ diskar i shad's RAID failade inom en kort tid. Vi håller
>>> på
>>>>> att
>>>>>>>> läsa tillbaka data från tape till SBCs andra server
>>>>>>>> grinner.pdc.kth.se. Alla hemkataloger är tillbaka, men
>>>>>>>> projektvolymerna kommer ta en (ännu okänd) bra stund till.
>>> Tyvärr
>>>>> så
>>>>>>>> har SBC optimerad sina AFS servrar för storlek, så det är mycket
>>>>> data
>>>>>>>> per server och spindel."
>>>>>>>> 
>>>>>>>> cheers,
>>>>>>>> Erik
>>>>>>>> _______________________________________________
>>>>>>>> Sbc mailing list
>>>>>>>> Sbc at sbc.su.se
>>>>>>>> https://mail.sbc.su.se/mailman/listinfo/sbc
>>>>>>> 
>>>>>>> 
>>>>> 
>>> 
>>> 
>>> 
>> 
> 
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