[Inparanoid] orthologs for chaetomium thermophilum

Panagiotis L. Kastritis pkastrit at gmail.com
Tue Apr 1 11:43:02 CEST 2014


Dear Prof. Erik Sonnhammer,

My name is Panagiotis Kastritis and I am a post-doc researcher in
EMBL-Heidelberg. I went through your inparanoid database with great
interest and I am very happy that such a resource exists for the
community.

I am working on the organism *Chaetomium thermophilum* (*Chaetomium
thermophilum* (strain DSM 1495 / CBS 144.50 / IMI 039719)), and its
genome has been published quite recently (Almacher et al, Cell 2011 -
PUBMED ID: 21784248). As a consequence 7182 entries exist in Uniprot
but ortholog mapping is, unfortunately, not present in your current
database version.
I would be deeply interesting in mapping orthologs of this organism to
those from other eukaryotes, as you have done in your database for all
these organisms.
Can you suggest me a way on how to do that or whether you plan to
update the database in the near future.

Thank you very much for the time you spent on my question,

Kind Regards,

Panos

-- 
__________________________________

Dr. Panagiotis L. Kastritis
European Molecular Biology Laboratory
e-mail: panagiotis.kastritis at embl.de
_________________________________
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