[Inparanoid] Performance of Inparanoid and blastall Warning

[Erik Sonnhammer]

Hi,

same answer as before - probably something goes wrong with Blast. Please 
check how many homologs are found, that will give a good idea if Blast 
worked or not.

Erik Sonnhammer

On 09/22/2014 11:45 AM, Sammy Desilva wrote:
> Hi I am doing two species clustering. In compare to OrthoMcl , the 
> Inparanod gives very few (5 time less ) clusters. What may be the 
> problem? Job executed on Ubuntu but I also Got a Warning message
>
> [blastall] WARNING: the -C 3 argument is currently experimental
>
>
> Please Help Me. Thanks
>
>
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