[Primeusers] Release 1.0 of PrimeGSR

[Filipe Garrett]

Hi,

I've just installed primeGSR and had some problems. It couldn't find the "g2f" library. I removed it 
from the Makefile and it compiled without errors. Run the sample files and everything perfect (at 
least I think since I don't know if the output is correct). What is the function of this library? Is 
it normal to compile without it?

Then I was trying primeGSR and managed to input everything correctly (I think). However an error 
occurred stating:

"
the state  is notError:
     not a valid alphabet state
"

I'm using this command line on a PC Fedora Core 7 Linux:
primeGSR -d -o output.mcmc -Bp 0.1 0.1 -Ed Gamma -i 1000 -t 10 -Sm JTT -Hi tree.nwk in_seq.fas in_seq.gs

Any help would be appreciated.
thanks in adv,
FG



Lars Arvestad wrote:
> Hi,
> We would like to announce release 1.0 of PrimeGSR. Find it at
> 
>     prime.sbc.su.se/primeGSR
> 
> As you are an "early adopter", I'd appreciate your comments regarding 
> the whole download-compile-try experience.
> 
>     Thanks,
>     Lars
> 

-- 
Filipe G. Vieira
Departament de Genetica
Universitat de Barcelona
Av. Diagonal, 645
08028 Barcelona
SPAIN
Phone: +34 934 035 306
Fax: +34 934 034 420
fgarret at ub.edu
http://www.ub.edu/molevol/