[Primeusers] PrimeGSR optimization with fixed tree

[Lars Arvestad]

Hi Jacky,
Could you please send the command line that you are actually executing?
   
    Lars


Jacky Hess wrote:
> Hello,
>
> I am trying to run primeGSR on a fixed gene tree to estimate the maximum 
> a posteriori probability but it looks like the optimization is stuck and 
> never really goes beyond the first set of values.
>
> Also I receive the following error messages which I suspect are related 
> to this:
>
> # Tried to set length of node 17 to 0 which is less than minimum 
> 4.45015e-308
>
> etc.
>
> Does anyone know what might be going wrong here?
>
> Thanks very much,
>
> Jacky
> _______________________________________________
> Primeusers mailing list
> Primeusers at sbc.su.se
> https://mail.sbc.su.se/mailman/listinfo/primeusers
>   


-- 
School of Computer Science and Communication
and Stockholm Bioinformatics Center
http://www.csc.kth.se/~arve