[Inparanoid] 转发：seek help for the usage of the InParanoid software

[Erik Sonnhammer]

Hi 凌若茗,

The score you are talking about is the 'inparalog score' and it is also 
shown in the inparanoid.pl output, but as a percentage. It is easier to 
parse this out in the SQL output.

Different results compared to the website could come from e.g. using 
different proteomes, different parameters, or different blast versions.

Erik Sonnhammer


On 2017-12-21 12:40, 凌若茗 wrote:
>
>
>
> ------------------ 原始邮件 ------------------
> *发件人:* "凌若茗";<mengling-zhang at qq.com>;
> *发送时间:* 2017年12月21日(星期四) 晚上7:36
> *收件人:* "inparanoid-at-sbc.su.se"<inparanoid-at-sbc.su.se at lists.su.se>;
> *主题:* seek help for the usage of the InParanoid software
>
> Dear staffs of InParanoid：
>
> Recently, I downloaded the local version Inparanoid 4.1 to analyse the 
> ortholog groups among some species. However,the result obtained 
> differed with it from the InParanoid website(as two attachments to 
> this letter).
> the website provides the InParanoid scores(0-1) and the bootstrap(%) 
> of each cluster, but there is no "InParanoid scores(0-1)", which is 
> vital for me, in my results. In this case, I feel disappointed for it.
>
> Could you help me with this problems? It will be very meaningful if 
> you can help！
> Hoping for your quick response! Thanks in advance！
>                                      Sincerely
>             a student from HZAU in China
>
>
>
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